G127418



Basic Information


Item Value
gene id G127418
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1735777 ~ 1736220 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU144773
TCCCTCTGATGTACTCGTTCCTAATTCTGTCCAACCTTGTCACTCCCAAAGAGAACCTCAACATCTTCAGCTCTGTTACCTCCAACTCTGACTCCTGTCTCTTCCTCAGTGACACTGTCTCTAAACCATACAGCATGGCAGGTCTCACCACGGTCTTGTACACCTTCCCCTTGATTCTCGCTGATATTTTCCTATCACACAGAACTCCCGACACCTTTCTCCACCCATTCCAACCTGCCTGCACTCGCTTCTTCACCTACTTCCCACACTCCCCATTACTCTGGACTGTTGAGCCCAAGTACTTAAACTCCTGTACCTTCTTCACCTCTT
>TU144772
TCCCTCTGATGTACTCGTTCCTAATTCTGTCCAACCTTGTCACTCCCAAAGAGAACCTCAACATCTTCAGCTCTGTTACCTCCAACTCTGACTCCTGTCTCTTCCTCAGTGACACTGTCTCTAAACCATACAGCATGGCAGGTCTCACCACGGTCTTGTACACCTTCCCCTTGATTCTCGCTGATATTTTCCTATCACACAGAACTCCCGACACCTTTCTCCACCCATTCCAACCTGCCTGCACTCGCTTCTTC
>TU144774
TGCCTGGCAGCTCCATGTCCAACATTCTCCTACCAATATACTCACTCTCCCTCCTCTGAACATGTGCAAACCATCTTAATCTAACGTTGTCCCCCAAACGTCCAACATGAGCTGTCCCTCTGATGTACTCGTTCCTAATTCTGTCCAACCTTGTCACTCCCAAAGAGAACCTCAACATCTTCAGCTCTGTTACCTCCAACTCTGACTCCTGTCTCTTCCTCAGTGACACTGTCTCTAAACCATACAGCATGGCAGGTCTCACCACGGTCTTGTACACCTTCCCCTTGATTCTCGCTGATATTTTCCTATCACACAGAACTCCCGACACCTTTCTCCACCCATTCCAACCTGCCTGCACTCGCTTCTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU144773 False 330 TUCP 0.49 1 1735777 1736106
TU144772 False 254 lncRNA 0.49 1 1735853 1736106
TU144774 True 368 lncRNA 0.49 1 1735853 1736220

Neighbor


gene id symbol gene type direction distance location
CI01000026_01660894_01664126 NA coding downstream 70504 1660511 ~ 1665349 (-)
CI01000026_01452548_01454060 NA coding downstream 281793 1451839 ~ 1454060 (-)
CI01000026_01433833_01436599 GPHA2 coding downstream 299254 1433820 ~ 1436599 (-)
CI01000026_01384408_01386103 ARL2 coding downstream 349750 1384364 ~ 1386103 (-)
CI01000026_01341481_01348949 NA coding downstream 386904 1341133 ~ 1348949 (-)
CI01000026_01855346_01933699 DYSF coding upstream 118464 1854684 ~ 1933699 (-)
CI01000026_02124326_02125256 NA coding upstream 387896 2124116 ~ 2125256 (-)
CI01000026_02267615_02268297 NA coding upstream 531082 2267302 ~ 2268335 (-)
CI01000026_02272961_02276148 ACHE coding upstream 536030 2272250 ~ 2276786 (-)
CI01000026_02282525_02307689 NA coding upstream 546185 2282405 ~ 2307868 (-)
G127403 NA non-coding downstream 28849 1706025 ~ 1707004 (-)
G127347 NA non-coding downstream 150027 1585505 ~ 1585826 (-)
G127353 NA non-coding downstream 157968 1577674 ~ 1577885 (-)
G127352 NA non-coding downstream 159829 1575789 ~ 1576024 (-)
G127350 NA non-coding downstream 161881 1573766 ~ 1573972 (-)
G128838 NA non-coding upstream 108525 1844745 ~ 1845219 (-)
G128839 NA non-coding upstream 109522 1845742 ~ 1845965 (-)
G128841 NA non-coding upstream 111482 1847702 ~ 1847989 (-)
G128842 NA non-coding upstream 113080 1849300 ~ 1849712 (-)
G128845 NA non-coding upstream 226379 1962599 ~ 1978280 (-)
CI01000026_00986386_01002180 NA other downstream 733264 986182 ~ 1002180 (-)
CI01000026_03439507_03490314 PDE3B other upstream 1644565 3438795 ~ 3490503 (-)
G129476 NA other upstream 1934354 3670574 ~ 3670884 (-)
G129658 NA other upstream 2631076 4367296 ~ 4373069 (-)
G129750 NA other upstream 3076830 4785885 ~ 4820249 (-)
G130256 NA other upstream 4539291 6275511 ~ 6317154 (-)

Expression



Co-expression Network