CI01000026_01452548_01454060


Basic Information

Item Value
gene id CI01000026_01452548_01454060
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1451839 ~ 1454060 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_01452548_01454060.mRNA
ATGTAAGATAAAGCAGGTTAGTTCTCTGAAGTCAGCTCTGAGAAATGTGGTTGTGTCAGTTTACACTATAAACGATCGCGGCGGGAAAGTCTGTCTGAGTTCAGACCAAAACACCGTTCTTGTTGGTGTCTCAAGAAGTTTAATCATGGCACAAATGTTCAGTATCTCTGACAATGAGTCAGAGACATCGGAAGACCGTGAGGACCCCGACCAGACAGAACATAACAGTGGATTGCCGCAGGGGAAGCAGCTCCGCACTGTGCCTGATAGCCTGAAAGGCGAGCAACTGGGGAGGCAGAGAAATCTCTCGATGAATGAGGATCTGCTGGAGGCCGGGGCAGCAGATGAAGGCGATTTCAGGCCTAGATCTCGCTCTGCTCCTCCTGCTTTGTGGGCTGCTAAGAAATATGGCCGACAGCTAAGGAGAATGAGCGATGAGTTTGACATCCTCCTTGATAAAGGGATGAAGAGGGTGAAGAGCGCAGGAACAGCACGTCAGATGCAGCAATCACCCAGCTGGTTGGCCTTCCTTTGGAGTCACAAAGAGTCTGATGCTGAGTCGCGCCCTGCAGAGTGATTGACGGTGAATGAATGATGGAAGAGGATAGAAAAGAGGACTACTGTACATAACAATTGGTGGCAGAAGAAAAGGATGCACTGCTTTGAAGAGAAGGATCAATTCCACTGACTGGACCCATTTCATGAACTGCACTGGAACCCTTGACTGTTGAAAAGCATGAACTGTATCTCACTTTGTGCTATTCCACAAAGACGGCAAAAATGGAGAATCTTCTTCTCTTTTGACTTTTCTTAAGCTCTGGGAATATTATGCAGTAAATTCCATGAACGTGAATGTGAGCTGGATATCAGCTTGTTCTAAACACACTTTCTGTCGCTCTGCCATATCGCTTTTTTAGGTTCAGATGAAATGCCTTTTAACAAAAGCACATCAAATGAAGGAATTATTAACAATATTTTTAGACAGCTGTACAAAATCTGTTTTTACTGTAAAGGCACTTTGGTCACTTAGAAGAGCCCTTCTGCTTTATTGCTATCTCTGAGTCATAAAAATCTCTTGGAATCTACAACCAACAATACCATTAAGAGCAAGAGTCCAAAAAACAAGAATGGGTCAAAATACCCATGAGAGCAAGAACAGAGGACAGCATCATTACTGGTATTACTTGAAAAAGACAAATTGTCAATGCCTTGTAACTTTTTTAATTAGTTAAAAACATTTTATTTCTTTGTTATTTTGTTGTTTGTAACAAGTATAGCCTAATAAA

Function

NR:

description
Bad protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_01452548_01454060.mRNA True 1286 mRNA 0.42 4 1451839 1454060

Neighbor

gene id symbol gene type direction distance location
CI01000026_01433833_01436599 GPHA2 coding downstream 15240 1433820 ~ 1436599 (-)
CI01000026_01384408_01386103 ARL2 coding downstream 65736 1384364 ~ 1386103 (-)
CI01000026_01341481_01348949 NA coding downstream 102890 1341133 ~ 1348949 (-)
CI01000026_01263538_01270706 ADAD2 coding downstream 181133 1263484 ~ 1270706 (-)
CI01000026_01241505_01244833 NA coding downstream 207006 1241505 ~ 1244833 (-)
CI01000026_01660894_01664126 NA coding upstream 206451 1660511 ~ 1665349 (-)
CI01000026_01855346_01933699 DYSF coding upstream 400624 1854684 ~ 1933699 (-)
CI01000026_02124326_02125256 NA coding upstream 670056 2124116 ~ 2125256 (-)
CI01000026_02267615_02268297 NA coding upstream 813242 2267302 ~ 2268335 (-)
CI01000026_02272961_02276148 ACHE coding upstream 818190 2272250 ~ 2276786 (-)
G127282 NA non-coding downstream 41293 1408930 ~ 1410546 (-)
G127279 NA non-coding downstream 50911 1399306 ~ 1400928 (-)
G127278 NA non-coding downstream 58231 1393407 ~ 1393608 (-)
G127275 NA non-coding downstream 63643 1387979 ~ 1388196 (-)
G127240 NA non-coding downstream 189435 1262190 ~ 1262404 (-)
G127294 NA non-coding upstream 17623 1471683 ~ 1519199 (-)
G127342 NA non-coding upstream 115723 1569783 ~ 1569994 (-)
G127343 NA non-coding upstream 116814 1570874 ~ 1571089 (-)
G127349 NA non-coding upstream 118709 1572769 ~ 1573045 (-)
G127350 NA non-coding upstream 119706 1573766 ~ 1573972 (-)
CI01000026_00986386_01002180 NA other downstream 449250 986182 ~ 1002180 (-)
G127418 NA other upstream 281717 1735777 ~ 1736220 (-)
CI01000026_03439507_03490314 PDE3B other upstream 1926725 3438795 ~ 3490503 (-)
G129476 NA other upstream 2216514 3670574 ~ 3670884 (-)
G129658 NA other upstream 2913236 4367296 ~ 4373069 (-)
G129750 NA other upstream 3358990 4785885 ~ 4820249 (-)

Expression


Co-expression Network