CI01000026_02267615_02268297


Basic Information

Item Value
gene id CI01000026_02267615_02268297
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2267302 ~ 2268335 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_02267615_02268297.mRNA
AGTAATTAATTAGACATTTCCTAAACATAAGGGCACAAATGAAAACAACCGTCAAGAGGAAGCTTTATGAAGATGGTGGAGTTCCTTTATCCACCGATTCACCAAAGAAGAGTACCAAAAAGGTGCCAGTTTCTATGGCTCCCCCAGCCCCACCTAAAGTCATCGCTGTGCCAACATCTCAGGTTGTGGTGACTACAGGTTTACAGCGCCCAACCACAGGTGCATCTAGCATTAAGTCATCAAAAACGGCAGATGTCACACTGAGTGCACTGAATGACTCTGATGCCAACAGCGATCTGGTAGATATCGAGGGGCTGGGTGATAGTTCCACATCTAAAAAGCTCAATTTTGATCAAGAAAGTCTAAATCTCGACTCCAGTCTCATCATGAATTCCAGTGACTTGCCATTGTTATCCCGTTGAAATCTTCTGCAACATGCTATCAGGAAAAGGAACTAATCATTTCACTTCATTGAGGCATCAAGAAACTTGCTTCTTTTTTTCTTTTTTTTAATCTGGTGAAAGTTTTCTCTTTTTTTTTTTTTTTCAGTAAAAGACTCATTTCTAAGTTAATAGTAAAGGTAGACATATTTTATCAATGTACAACACAGTTTTGAAAGATGCTAGTAAATATTGCTTGATACATATTACTGTTCTGGGTCCAAAATGCCTAATTTTAAAATAAGTTACTGTAAAGGCATTATTGTGTATATATTTTTTAACCATTTTCAATAAA

Function

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_02267615_02268297.mRNA True 735 mRNA 0.37 3 2267302 2268335

Neighbor

gene id symbol gene type direction distance location
CI01000026_02124326_02125256 NA coding downstream 142046 2124116 ~ 2125256 (-)
CI01000026_01855346_01933699 DYSF coding downstream 333603 1854684 ~ 1933699 (-)
CI01000026_01660894_01664126 NA coding downstream 601953 1660511 ~ 1665349 (-)
CI01000026_01452548_01454060 NA coding downstream 813242 1451839 ~ 1454060 (-)
CI01000026_01433833_01436599 GPHA2 coding downstream 830703 1433820 ~ 1436599 (-)
CI01000026_02272961_02276148 ACHE coding upstream 3915 2272250 ~ 2276786 (-)
CI01000026_02282525_02307689 NA coding upstream 14070 2282405 ~ 2307868 (-)
CI01000026_02320946_02326011 NA coding upstream 52431 2320766 ~ 2326011 (-)
CI01000026_02371965_02372328 NA coding upstream 103508 2371843 ~ 2372863 (-)
CI01000026_02399337_02399549 NA coding upstream 130579 2398914 ~ 2399709 (-)
G128786 NA non-coding downstream 10398 2255135 ~ 2256904 (-)
G128762 NA non-coding downstream 18382 2246454 ~ 2248920 (-)
G128940 NA non-coding downstream 93237 2173784 ~ 2174065 (-)
G128765 NA non-coding downstream 113956 2148824 ~ 2153346 (-)
G128926 NA non-coding downstream 124611 2142427 ~ 2142691 (-)
G129042 NA non-coding upstream 120591 2388926 ~ 2389136 (-)
G129005 NA non-coding upstream 166527 2434862 ~ 2436045 (-)
G129048 NA non-coding upstream 192262 2460597 ~ 2460849 (-)
G129049 NA non-coding upstream 199287 2467622 ~ 2468003 (-)
G129068 NA non-coding upstream 344249 2612584 ~ 2612857 (-)
G127418 NA other downstream 531196 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 1264713 986182 ~ 1002180 (-)
CI01000026_03439507_03490314 PDE3B other upstream 1112450 3438795 ~ 3490503 (-)
G129476 NA other upstream 1402239 3670574 ~ 3670884 (-)
G129658 NA other upstream 2098961 4367296 ~ 4373069 (-)
G129750 NA other upstream 2544715 4785885 ~ 4820249 (-)
G130256 NA other upstream 4007176 6275511 ~ 6317154 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034745 zgc:92664 coding NC_007118.7 CM002891.2 26073114 ~ 26076970 (-)