XLOC_008373 (diabloa)


Basic Information

Item Value
gene id XLOC_008373
gene name diabloa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14854666 ~ 14858189 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016775
CACCATGTGCTTACAGCTAAATAATGTTTACCACAGCCCTTTGTGCTGACGTAGTGTGTACACTTGCGTCAAACCCTATCTTTCCTTGAACTTAAACCAGTAAAATCAAGATTAGGGGTCCGAATAAACGGATCAATATAGCCTGCATGAAGGGGCAGAGTCCCATTAGCAAAGTATAAATACTGGTGGGTAGTGCTgtcagttttaaacattcaaaagcttcactcagaaaaaaaacaggcttaAGGAATACATATAATATTTCTTTATAGTTTGGATTAAGCTATTAAACAATATGCAGGCTGTTAAAAACTGCGGTTTGTGTGCTAGTGGGAGTTTTCTTAAAGGCCGGACCGACTTCCTGCTCGCCCGGAGAAATATGGCTGTGCTGCGGATGAGCGCCGCATGCGTTCAGCTTCTCAAGGATAAGACCAGCGTGCTGTGCAACAGCTCTGTTCATCAGCGACTTCTGCAGCGCCTGCCAAACGTTGCTCGATCCAATGCAGTCCCGTTCAGTGTCGGCACTGGGCTCTGCGCGATGCCTTTTACACAGCAGGTTGAAAATCTCTCGCATGAATCTCTGATTCGTCGAGCATCATGTCTGGTCACTGACAGCGCCAACACGTACCTCTCTCAGACCACTCTAGCCCTGGTGGACGCCCTCACACAGTACGCCAAGGCACTACATACACTCATCAGCCTTCAGAAGCGATACATCGCCTCAATAGGGAAACTGAGCCCTGTTGAAGAGGACAGCATTTGGCAGGTCATCATTGGCCAGCGGGTGGAGGTTAGTGATCAATTAGAAGAATGTAAACGCTTCGAGTCAAACTGGATGAACGCCATCAACATTTGCGAGTTGTCAGCAGAAGCAGCCTACAATTCAGGAGCCGAGCATGCATGCACAGCAACAAAGACTAATCTGCAAGTGGCTCAATCTAAAGTGGAAGAGATTAGGAAGATCTCAAAAGAAGCGGAGAAAAAACTGGCGGAAACAAAAGCTGAAGAAATCCAGAGAATGGCCGAGTACGCCTCCAGCATTGACATTCATGATCTGGAAGACGTTCCAGAGGCCTACCTTCGTGAAGACTagaaaaacaaaatgcacagaCTTTCTTTAGTTTGCTATTTCTGTAGCGAGCAACGAATCAACAATAAGTTTGAATGAATCCAGATTGCACCTTGACTTGAATTAACAATCAGTATAGATTATGAAAATGAACGAGTGTTCACAACATCAAAAAACAAGTAATCTATTTGAAATAACTTGTATTCAGTGATTTAATGCAGCatgtaagttgctttggaaaTAATATtgatgtatatttgtatatatgtatatatattttttcatgtcCATTAAATATCACCGGCTGTTGTGATATTGCAGTGTACTTCCACAAAAATGTAATCAATcttgttttatatttgtaaaagATCGACTTATTTATTATGCTAATAAATGCAATGTTTATTAA
>TCONS_00016776
actcagaaaaaaaacaggcttaAGGAATACATATAATATTTCTTTATAGTTTGGATTAAGCTATTAAACAATATGCAGGCTGTTAAAAACTGCGGTTTGTGTGCTAGTGGGAGTTTTCTTAAAGGCCGGACCGACTTCCTGCTCGCCCGGAGAAATATGGCTGTGCTGCGGATGAGCGCCGCATGCGTTCAGCTTCTCAAGGATAAGACCAGCGTGCTGTGCAACAGCTCTGTTCATCAGCGACTTCTGCAGCGCCTGCCAAACGTTGCTCGATCCAATGCAGTCCCGTTCAGTGTCGGCACTGGGCTCTGCGCGATGCCTTTTACACAGGTAGTTAACAACCTTAATTTCATAAAgcgtttttaaaatatatgttataaGTTGTGGACAGTTTGCAAACCGCAGGAACGGACACTCGAGAGCGCGACAGCAACGATAATAACGTTACACGTTTGTTCATCTGAATGAAGATGATTCTGATTCTGACTCGGTTCGCATTTGATTCGATTCTTTTAGTATACTTCAGTTTTCAATCTCAGTGGACCTGTCACGTTGCTTAAGTAAATTCTTAATTTTTCCAGGAAAATAAATCTATAGGACGTTTTAAATAGTTTCCCTGAGGAAGTTTTGCTATGCTAAGTTTATCATTTGTTTTCGTTGTAAAAATGGTTATACATCACATTTCACTCCTCAGATACACATTATTTAGTGttgttagtatatatatatatatatatatatatatatatatatatatatatatatatatatataactgttaaTTTTTATAA
>TCONS_00016777
aatcttttctttttctttttttcctttctccAGCAGGTTGAAAATCTCTCGCATGAATCTCTGATTCGTCGAGCATCATGTCTGGTCACTGACAGCGCCAACACGTACCTCTCTCAGACCACTCTAGCCCTGGTGGACGCCCTCACACAGTACGCCAAGGCACTACATACACTCATCAGCCTTCAGAAGCGATACATCGCCTCAATAGGGAAACTGAGCCCTGTTGAAGAGGACAGCATTTGGCAGGTCATCATTGGCCAGCGGGTGGAGGTAAGtgctctgtttatttactttttgtccAACAAGGTCTGCTAAGTGCTGTTGAACTAATGCAATCAGATTGATCTTGATTAGCTGGACTGATTAACAGACCTTGTTGATTTCGTACTTGTTATCTAAGCTCACTCTCACAGCATTGACATTGTTCGTCTTTCTCTTTCCAGGTTAGTGATCAATTAGAAGAATGTAAACGCTTCGAGTCAAACTGGATGAACGCCATCAACATTTGCGAGTTGTCAGCAGAAGCAGCCTACAATTCAGGAGCCGAGCATGCATGCACAGCAACAAAGACTAATCTGCAAGTGGCTCAATCTAAAGTGGAAGAGATTAGGAAGATCTCAAAAGAAGCGGAGAAAAAACTGGCGGAAACAAAAGCTGAAGAAATCCAGAGAATGGCCGAGTACGCCTCCAGCATTGACATTCATGATCTGGAAGACGTTCCAGAGGCCTACCTTCGTGAAGACTagaaaaacaaaatgcacagaCTTTCTTTAGTTTGCTATTTCTGTAGCGAGCAACGAATCAACAATAAGTTTGAATGAATCCAGATTGCACCTTGACTTGAATTAACAATCAGTATAGATTATGAAAATGAACGAGTGTTCACA
>TCONS_00016778
TCTCAGACCACTCTAGCCCTGGTGGACGCCCTCACACAGTACGCCAAGGCACTACATACACTCATCAGCCTTCAGAAGCGATACATCGCCTCAATAGGGAAACTGAGCCCTGTTGAAGAGGACAGCATTTGGCAGGTCATCATTGGCCAGCGGGTGGAGGTTAGTGATCAATTAGAAGAATGTAAACGCTTCGAGTCAAACTGGATGAACGCCATCAACATTTGCGAGTTGTCAGCAGAAGCAGCCTACAATTCAGGTatgttaatgaattaataataataaattatttattaaattattaattatttaattaataaacctattacttttaaaggaatagttcacccaaaaataaaatgatttattcgTCCTCCATTTATTCTAAACTAGTTTCAGCTTCTTATATTAAACGCAAATGAAGATATATTGATGAATGCTGGAAAAACAAACAACCATTGActttgtattagtattttttgttcctactctgggggaggcagtggcgcagtaggtagtgctgtcgcctcacagcaagaaggttgctgggttgctggttcgaaccttagctcagtcggcgtttctgtgtggagtttgcatgttctccctgcctttgcgtgggtttcttccgggtgctccggtttcccccacagtccaaagacatttggtacaggtgaattgggtaggctaaattctccgtagtgtatgagtgtgtgtgtgaatgctggaagggcatccgctgcgtaaaaactggctggataagtttgcggttcattccgctgtggcgaccccagattaaacaagaaaattaatgaatgttcctactattgatgtcaatggctactttttttcagaatttattgaaatgtcttgttttgtgATCAAATAAATTCATAAG

Function

symbol description
diabloa Predicted to be involved in activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c; intrinsic apoptotic signaling pathway in response to oxidative stress; and neuron apoptotic process. Predicted to act upstream of or within activation of cysteine-type endopeptidase activity involved in apoptotic process and apoptotic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; lens; pectoral fin; and solid lens vesicle. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 64. Orthologous to human DIABLO (diablo IAP-binding mitochondrial protein).

GO:

id name namespace
GO:0051402 neuron apoptotic process biological_process
GO:0006915 apoptotic process biological_process
GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress biological_process
GO:0008635 activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c biological_process
GO:0005739 mitochondrion cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1303 Predicted to be involved in activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c; intrinsic apoptotic signaling pathway in response to oxidative stress; and neuron apoptotic process. Predicted to act upstream of or within activation of cysteine-type endopeptidase activity involved in apoptotic process and apoptotic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; lens; pectoral fin; and solid lens vesicle. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 64. Orthologous to human DIABLO (diablo IAP-binding mitochondrial protein).

Ensembl:

ensembl_id ENSDARG00000104172

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016775 False 1478 mRNA 0.42 6 14854666 14858189
TCONS_00016776 False 791 lncRNA 0.37 2 14854889 14855766
TCONS_00016777 False 887 lncRNA 0.43 3 14856196 14857945
TCONS_00016778 True 895 mRNA 0.41 3 14856307 14857464

Neighbor

gene id symbol gene type direction distance location
XLOC_008372 or130-1 coding upstream 1087 14826966 ~ 14853579 (+)
XLOC_008371 sars2 coding upstream 187571 14642641 ~ 14667095 (+)
XLOC_008370 FBXO46 coding upstream 254370 14592624 ~ 14600296 (+)
XLOC_008369 si:ch211-11n16.2 coding upstream 434102 14378829 ~ 14420564 (+)
XLOC_008368 NA coding upstream 604737 14249389 ~ 14249929 (+)
XLOC_008374 CR936977.2 coding downstream 3146 14861335 ~ 14964241 (+)
XLOC_008375 si:ch211-149e23.4 coding downstream 315422 15173611 ~ 15218956 (+)
XLOC_008376 med29 coding downstream 374666 15232855 ~ 15237211 (+)
XLOC_008377 c2cd3 coding downstream 400569 15258758 ~ 15311768 (+)
XLOC_008378 camkk1b coding downstream 456000 15314189 ~ 15331501 (+)
XLOC_008463 BX663520.1 misc downstream 6394002 21252191 ~ 21252282 (+)
XLOC_008363 BX927244.2 non-coding upstream 801200 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 896816 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 non-coding upstream 1329678 13524874 ~ 13524988 (+)
XLOC_008359 CABZ01009248.1 non-coding upstream 1345298 13421514 ~ 13509368 (+)
XLOC_008379 NA non-coding downstream 489453 15347642 ~ 15351457 (+)
XLOC_008384 NA non-coding downstream 592614 15450803 ~ 15452516 (+)
XLOC_008388 NA non-coding downstream 771317 15629506 ~ 15665686 (+)
XLOC_008390 NA non-coding downstream 920799 15778988 ~ 15782552 (+)
XLOC_008393 NA non-coding downstream 1128865 15987054 ~ 16018789 (+)

Expression


Co-expression Network