CI01000026_10917489_10918872


Basic Information

Item Value
gene id CI01000026_10917489_10918872
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10915851 ~ 10919196 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10917489_10918872.mRNA
CTATAAAACTAGGGCAACTGGAAAGAAAGAGAATGACAGAGAAAAAGCAGGAAAGAGAGCTATAACAGGTAAAGTTACTGGTGAGAAAGCTCTGCCAATGAGGAAAAGAATTTCTCAGTATTAGGTTTCATCTTTATAAACTCTTGTGTGAACCCAGCACACTTAATCTGAAATGATTTCTCATCACTTGAATTGACTCTTAGCACTCCATAGACAAGAGCAAATAATCGGAAAGAGGAGAGCAAGCAGCCAAATTGGTGAAATGATTCAGTGGAATCAATCTATGTAATCAGACACTGAATCATCTTCATCATCTTCCACTCATGTATGTGTCTTATCCCCCTAGTGAACTGATGTATTGCAGTTACGTAACTGGAAAGTTATCCAATCAGACAGAGATCATTTGTCATTCAAAATTATGAAAAAATAGGTTGTGTGAAGAATACACAGAAGAGTATTGGTGCCTGGTCAATAATGGTTCTAATTTCATATACAAACCCTCTGTACTTTATAATCCAGACACTAACAGAGGACATCATGCTGTTTATGGGTCAGCTCCGTTTTAATGCTAGTTCCTAAATTTCATCTAGTTATTAAGTTATAGTTTATAAGCTAGCTCACATTTAAAGGAACACTCCACTTTTTTTGAAAATGAATCTGATTAGACCGTTAGCATCTTGCTCAAAAATGACCAAAGAGTTTCGATATTTTTCCTATTTAAAACTTGACTCTTCTGTAGTTACATTGTGTACTAAGACCGACAGAAAATGAAAAGTTGCGATTTTCTAGGCCGATATGGCTAGGAACTATACTCTCATTCCGGCGTAATAATCAAGGAACTTTGCTGCCATACCATGGGTGCAGCAGGCGCAATGATATTGTCTTTCACAAATGTCTTTCACAAATGTCTCCATGGTTGCAAGGCACGCTCCCTCTGCAAGCAGGGGGTCACAGGCACTGTGTAATATCATTGCGCCTGCTGCACCCATGGTACGGCAGCAAAGTTCCTTGATTATTACGCCGGAATGAGAGTATAGTTCCTAGCTATATCGGCCTAGAAAATCACAACTTTTCATTTTCCGTCAGCCTTAGTACACAATGTAACTACAGAAGAGTCAAGTTTTAAATAGGAAAAATATCCGAAACTCTTTGGTCATTTTTGAGTAAGATGCTAACGGTCTAATCAGATTCAATGAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCAGACCCGGAGATCGGCTGAATGGATTCGGAAACGGTAAAACTCAACTGTTTAACTCTAGGGGAGTTGGAAAATGAGCCTATTTACAAAAAAAGTGGAGTGTTCCTTTAAGACTGTTATTGTCAGGACAGTATATTTACTGCAGAGTTTTAACAAATAAAACAAGACCTATTAAGCTATTATTTCTATTTACATGTGTCCTCTTGCATTGTTAAATTCAAATTTTTGCTTTCAGAGTGTATCTGAGATCAATTTTAATCTCCACCTTTAAAGAGCCTTGCATGAATTCAACATGAATAATGTTGCTGTCATGAAAACATCTTACTATTGGTTTTAAAAGTGAAATTCAGGTTTGGGTAATGGACAGTCAAGGCTGTATGCTGTATAGTATTCAGTCTTTCATGTGCGTCAATGGCTGAAGTGCTCGGAAATCAATGCGCTGTCGCTTTAAACGAAGTGAAAGCCGATATGGACACCATATTGGACAACTTCGGGTCGGACAAACTTTTTCCCAATTCCAACCTGTTGGACCTAGAGGATCTGAATGAGAGCGATTTCTTATCCAATGTGGTGATATTGGCAGTTAAGTTAAGGCTATCTTACTGTGAGGTAAAGGATGCATGAGGTAACTTTGGGCAAACAAATTGCACAACAAAAAACATGCGTCTCCCTTGCGAAGACATCAAAAGTTATCGTAAGAAGGAATATTTCTACTAAAAATGTACTCCCCATCATTTTTTTCCAAATCAGACTTTTGTTTTTCCATGGAACATTAACGGTGAATTGTTTTGAGAATATCCCAGCCTCTTATTTTTATAAAGGTCTATTGAAAGTGAATTACGACTGGGACTGTTGAGGTCCAAAACGTAAACCGTTGACCAATGTGTGGGAAATAAAAAGTATTATAAAAGTGGTCTCTCCGGCTTATGCACTATATTCCAAGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10917489_10918872.mRNA True 2175 mRNA 0.38 3 10915851 10919196

Neighbor

gene id symbol gene type direction distance location
CI01000026_10871203_10872334 NA coding upstream 43512 10871203 ~ 10872339 (+)
CI01000026_10865287_10867398 NA coding upstream 48417 10865287 ~ 10867434 (+)
CI01000026_10862630_10863790 HARBI1 coding upstream 51443 10862630 ~ 10864408 (+)
CI01000026_10841434_10850234 ARHGAP1 coding upstream 65607 10841434 ~ 10850244 (+)
CI01000026_10831971_10837028 F2 coding upstream 78786 10831971 ~ 10837065 (+)
CI01000026_10930798_10950198 CREB3L1 coding downstream 11602 10930798 ~ 10950313 (+)
CI01000026_10955581_10955874 NA coding downstream 35618 10954814 ~ 10955913 (+)
CI01000026_11012960_11021926 NA coding downstream 92144 11011340 ~ 11021926 (+)
CI01000026_11032284_11063044 NA coding downstream 112483 11031679 ~ 11063625 (+)
CI01000026_11075931_11078249 MDK, MDKA coding downstream 156588 11075784 ~ 11079080 (+)
G133426 NA non-coding upstream 8176 10907475 ~ 10907675 (+)
G133420 NA non-coding upstream 20692 10886053 ~ 10895159 (+)
G133406 NA non-coding upstream 130289 10784792 ~ 10785562 (+)
G133383 NA non-coding upstream 287775 10552960 ~ 10628076 (+)
G133373 NA non-coding upstream 400203 10515420 ~ 10515648 (+)
G133442 NA non-coding downstream 199515 11118711 ~ 11119022 (+)
G133443 NA non-coding downstream 200452 11119648 ~ 11119877 (+)
G133444 NA non-coding downstream 201313 11120509 ~ 11120750 (+)
G133454 NA non-coding downstream 225113 11144309 ~ 11153397 (+)
G133491 NA non-coding downstream 274165 11193361 ~ 11193825 (+)
G133192 NA other upstream 753890 10159819 ~ 10161961 (+)
G132667 NA other upstream 1346691 9568739 ~ 9569160 (+)
G131077 NA other upstream 2409064 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2616437 8297857 ~ 8307629 (+)
G130967 NA other upstream 2726778 8188374 ~ 8189073 (+)
CI01000026_11241496_11246081 NA other downstream 325737 11241496 ~ 11246204 (+)
G133542 NA other downstream 556921 11476117 ~ 11477544 (+)

Expression


Co-expression Network