G133442


Basic Information

Item Value
gene id G133442
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11118711 ~ 11119022 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151707
GGACAATCTCAGAAGGATGAACAAATAATGTTTGTGGTCATCACATTAAAAATAACATTTGAAGTACTGGGGGAAAAACACTGCGTGTGTATGTCTAATTACTGACAAGGCGTTTTTAAACGGTCCCAATAGCTTCATCTTTATTGCAATCGATAAAACTGGTTTATTGGCAAATTAGGTAAATGTGATAGCGGCATTAAAATATGAATACAACATTAAAAAGTCAATCATTGATGGTTTTGTGTCGATGTACAGCGAGTACAGAATGAACAGCTAACAGTTTACCGGAAATGCCCGAGCTGGCTTAACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151707 True 312 lncRNA 0.37 1 11118711 11119022

Neighbor

gene id symbol gene type direction distance location
CI01000026_11075931_11078249 MDK, MDKA coding upstream 40255 11075784 ~ 11079080 (+)
CI01000026_11032284_11063044 NA coding upstream 55086 11031679 ~ 11063625 (+)
CI01000026_11012960_11021926 NA coding upstream 96785 11011340 ~ 11021926 (+)
CI01000026_10955581_10955874 NA coding upstream 162798 10954814 ~ 10955913 (+)
CI01000026_10930798_10950198 CREB3L1 coding upstream 168398 10930798 ~ 10950313 (+)
CI01000026_11203781_11212074 NA coding downstream 84759 11203781 ~ 11212582 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 120317 11239339 ~ 11240433 (+)
CI01000026_11241496_11246081 NA coding downstream 122474 11241496 ~ 11246204 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 142059 11261081 ~ 11264534 (+)
CI01000026_11266022_11278889 NA coding downstream 147000 11266022 ~ 11278899 (+)
G133426 NA non-coding upstream 211036 10907475 ~ 10907675 (+)
G133420 NA non-coding upstream 223552 10886053 ~ 10895159 (+)
G133406 NA non-coding upstream 333149 10784792 ~ 10785562 (+)
G133383 NA non-coding upstream 490635 10552960 ~ 10628076 (+)
G133373 NA non-coding upstream 603063 10515420 ~ 10515648 (+)
G133443 NA non-coding downstream 626 11119648 ~ 11119877 (+)
G133444 NA non-coding downstream 1487 11120509 ~ 11120750 (+)
G133454 NA non-coding downstream 25287 11144309 ~ 11153397 (+)
G133491 NA non-coding downstream 74339 11193361 ~ 11193825 (+)
G133501 NA non-coding downstream 136987 11256009 ~ 11256267 (+)
G133192 NA other upstream 956750 10159819 ~ 10161961 (+)
G132667 NA other upstream 1549551 9568739 ~ 9569160 (+)
G131077 NA other upstream 2611924 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2819297 8297857 ~ 8307629 (+)
G133542 NA other downstream 357095 11476117 ~ 11477544 (+)

Expression


Co-expression Network