CI01000026_11203781_11212074


Basic Information

Item Value
gene id CI01000026_11203781_11212074
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11203781 ~ 11212582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_11203781_11212074.mRNA
CCAATCACGTTACGTGTTTTTAAAGCTGCAGAGTGCGTTGACCAATGGGAGCGCTCCTCTACCCGGAAAAACTTGCAGTTCGGCTTGTTTTCTGTTTGCCAGACCAGCCAGGCAACGATCGTTCAATGAGGTTACTGTACTCTACCTCAGCTGCTCGTCCGCAAGTATGGATTCTTGTTTTCTGATCGTCGTGTTTGTCTTCGCTTTCAGTCTTTCCAGTGGAGAGAGGACGCTCAAGTTTGTCACTGTGCTCTATCGTCATGGCGACAGATCTCCAATCAAGGCCTATCCAACTGATCCCTACAAGGAGAGTGACTGGCCCCAGGGTTTTGGACAGCTCTCTCAGGAGGGAATGAAGCAGCACTATGAACTAGGTCAGTTTTTAAAGAAACGCTACAGAGGATTCCTGAGTGAGGACTATGACCGGCATGAGGTCACTGTCTCTTTAAATTTCTGTTTAAACATGTTCAATGAACAGATACACAAAGTTGTCAGACTTGCATGTTTAAATAGCATATTCATATTGCAAATTGTGTTGCAGATATTCATCAGAAGTACAGATGTTGACCGGACTCTGATGAGTGCAGAAGCTAACCTGGCTGGCCTGTTCCCACCTAACAGTTCTGAGGAGTTTAATCCAGGTTTGAATTGGCAGCCGATACCTGTTCACACTGTCCCAGTGGATAAAGAGAAGCTGCTCTCATTCCCGCTAGAAGACTGTCCACGTTACACACAGCTCATGAATGAGACTGAAAAATCAGACATTTTTCTTAACATGACTGCCATTTACAAGGCATTTATAGAAATGGTGAGAAATAAAACAGGACTGGAGACGACCTCCCTTGAGTCTATTTGGAGTGTCTATGACACATTGTTCTGTGAGGCAAAACATGGGAAGAAACCACCTGGCTGGGTGACTCCAGATGTAATGGAAACTCTGAAGGTGCTGAAGAACTTTGGTTTTCAGATTCTGTTTGGAGTCTATAAGAGAAAGGAGAAGTGCAGACTTCAGGGAGGCCTCCTGTTAAAGCAGATCATTAAGAATCTCTCAATTGCTGCAGCTCCAGACTCTAAAGAAAAAGTGAAGATGATGGTATACTCAGCTCATGACACAACAGTTGTAGCTCTGCAGGAAGCCCTGAATGTCTTTAATGGCCTGCAGCCACCTTATGCCTCGTGTCATTTAATTGAACTTCACCAGGAAGAGAACGGGACGTTTTCAGTGGAGATGTTTTATCGCAATGACAGTGCCGTGTCTGAGCCATACGCTGTGTCTATACCGGGCTGTTCCCAGTCCTGCCCCCTACAGGACTTTGTGAACCTCACACGTGATGTCATACCACAAGACAGGATTAAAGAGTGTCAGATAAAGAAAGAAGCCACGGGCACTGAGGTCATCATCGGGCTGGCTGTGTGTGGATGTCTGCTCTTTCTGCTGGTACTACTGCTGTTTGTAGTGCTATGCCGTCAAAAAGACCCGATGGCTAGCTACAGTCATGTCATAAATGAGAGCGACTCCTGACAATCATATCAGCTCCTCCGCAAAGAGGACCAGTGGGACAGTGAAGAGGACCTATGAGAACATAGCGCCAACTTGTTGAGAAACTCTAAGCCTACTGAAAAGACTTTTTTTTTTACTTTGGCAACACATTTTATTATATTAGGGATGGAACATTTGGTAATGTTTTATTACTTGTAACTTCAAGTGTTTCAAGAGAGAAAAGGGAACTAAGAGTTGTGATGGCATCAGTGGCATTAACGTAACAATGCTTAGCGCACAGACTCCGTAACTGTGCAATGATGATTGTGTGTCATTGGCTCTGGGCTTTTGTTGTAATGAAAGATTGTGACTGTGTGTAAAAAGGAGGATCTGAGATGTGGACTAGACTAAAGCTCCCCCAGAGGTGTGTGTCCTCTCTGAAAGACAAGGACCGTTAGTGTCCCCCTGTTTGTGCTTTTGGTCCCTTAATTTTAGTGTACTTATGAGCCCAGTGTACTTGATGCATCAGCCTAAAGTTTTAGGTTGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_11203781_11212074.mRNA True 2030 mRNA 0.45 10 11203781 11212582

Neighbor

gene id symbol gene type direction distance location
CI01000026_11075931_11078249 MDK, MDKA coding upstream 125325 11075784 ~ 11079080 (+)
CI01000026_11032284_11063044 NA coding upstream 140156 11031679 ~ 11063625 (+)
CI01000026_11012960_11021926 NA coding upstream 181855 11011340 ~ 11021926 (+)
CI01000026_10955581_10955874 NA coding upstream 247868 10954814 ~ 10955913 (+)
CI01000026_10930798_10950198 CREB3L1 coding upstream 253468 10930798 ~ 10950313 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 26757 11239339 ~ 11240433 (+)
CI01000026_11241496_11246081 NA coding downstream 28914 11241496 ~ 11246204 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 48499 11261081 ~ 11264534 (+)
CI01000026_11266022_11278889 NA coding downstream 53440 11266022 ~ 11278899 (+)
CI01000026_11298219_11305000 NA coding downstream 85637 11298219 ~ 11305013 (+)
G133491 NA non-coding upstream 9956 11193361 ~ 11193825 (+)
G133454 NA non-coding upstream 50384 11144309 ~ 11153397 (+)
G133444 NA non-coding upstream 83031 11120509 ~ 11120750 (+)
G133443 NA non-coding upstream 83904 11119648 ~ 11119877 (+)
G133442 NA non-coding upstream 84759 11118711 ~ 11119022 (+)
G133501 NA non-coding downstream 43427 11256009 ~ 11256267 (+)
G133514 NA non-coding downstream 108283 11320865 ~ 11321130 (+)
G133515 NA non-coding downstream 108673 11321255 ~ 11321553 (+)
G133516 NA non-coding downstream 109222 11321804 ~ 11324137 (+)
G133519 NA non-coding downstream 119484 11332066 ~ 11332275 (+)
G133192 NA other upstream 1041820 10159819 ~ 10161961 (+)
G132667 NA other upstream 1634621 9568739 ~ 9569160 (+)
G131077 NA other upstream 2696994 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2904367 8297857 ~ 8307629 (+)
G133542 NA other downstream 263535 11476117 ~ 11477544 (+)

Expression


Co-expression Network