G133491


Basic Information

Item Value
gene id G133491
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11193361 ~ 11193825 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151771
ATTTGGGGTTAGTACAATTTTTATTCAGCAACGATGCATTAAATTGATGAAAAGTGATAGTCAAGACACTTACAATATTATAAAAGATTTATATTTGAAATAAATGCTGTTCTTTTGAACTATTAATTAAAGAATCATGAAAAAAATGTATCAGTTTCCATAAAGTTATTATGCAGCACAACAGTTTTTAACTGTGATAAGAAAGGTTTCTTGATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGGCTGCTGAAATCACAGGAATAAATAATATTTTAAAATATATTTAAAAAGAAAACATTTAAGATTGTCATAATATTTTTCAATCTTGCTGTTTTTACTGTATTTTTGATCAAATAATTGCAGTCTTGGTGAGAATAAGAGACTTCTTTACAAAAAAAAAAACAGTAGCTACCCTAAACATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151771 True 438 lncRNA 0.27 2 11193361 11193825

Neighbor

gene id symbol gene type direction distance location
CI01000026_11075931_11078249 MDK, MDKA coding upstream 114905 11075784 ~ 11079080 (+)
CI01000026_11032284_11063044 NA coding upstream 129736 11031679 ~ 11063625 (+)
CI01000026_11012960_11021926 NA coding upstream 171435 11011340 ~ 11021926 (+)
CI01000026_10955581_10955874 NA coding upstream 237448 10954814 ~ 10955913 (+)
CI01000026_10930798_10950198 CREB3L1 coding upstream 243048 10930798 ~ 10950313 (+)
CI01000026_11203781_11212074 NA coding downstream 9956 11203781 ~ 11212582 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 45514 11239339 ~ 11240433 (+)
CI01000026_11241496_11246081 NA coding downstream 47671 11241496 ~ 11246204 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 67256 11261081 ~ 11264534 (+)
CI01000026_11266022_11278889 NA coding downstream 72197 11266022 ~ 11278899 (+)
G133454 NA non-coding upstream 39964 11144309 ~ 11153397 (+)
G133444 NA non-coding upstream 72611 11120509 ~ 11120750 (+)
G133443 NA non-coding upstream 73484 11119648 ~ 11119877 (+)
G133442 NA non-coding upstream 74339 11118711 ~ 11119022 (+)
G133426 NA non-coding upstream 285686 10907475 ~ 10907675 (+)
G133501 NA non-coding downstream 62184 11256009 ~ 11256267 (+)
G133514 NA non-coding downstream 127040 11320865 ~ 11321130 (+)
G133515 NA non-coding downstream 127430 11321255 ~ 11321553 (+)
G133516 NA non-coding downstream 127979 11321804 ~ 11324137 (+)
G133519 NA non-coding downstream 138241 11332066 ~ 11332275 (+)
G133192 NA other upstream 1031400 10159819 ~ 10161961 (+)
G132667 NA other upstream 1624201 9568739 ~ 9569160 (+)
G131077 NA other upstream 2686574 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2893947 8297857 ~ 8307629 (+)
G133542 NA other downstream 282292 11476117 ~ 11477544 (+)

Expression


Co-expression Network