CI01000026_12591049_12624688 (PRKDC)


Basic Information

Item Value
gene id CI01000026_12591049_12624688
gene name PRKDC
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12590785 ~ 12626438 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_12591049_12624688.mRNA
AGTAAAATTTTCGATACCACAGCAAAACTGTAGCCAAAAAACTTTAGCCTAACTGTAAGGTTCAAACATTATTAAAAAAAGGTAAACGATCAGTAATAAAAACAAACAAACAAATAAACTAATTACAAACAATAACACAAATATAGGCTACAATAGAACAAAGAAGAAATAAATGAAATAAACATGGCATTAAGATGTTCAGATAGGTTTAACAGTAGGCCTATTCAAGTACAGAAATTGAATAATAAAATGTTAAATAACTCTGTAATCTTCACCCTATAAATTAAATACAGATTATTCCCTGTTAAAGCTACAAAAGTTATTCATTCAAGAGCAGTGAGTGATTTTCTGTCTTTTTAGTTGTTTCATTAACATTTTGCTGTCACTTTAAGACCGATTTTTAAGCACAACCGATTTTTTTGTTTACGTTCACTTAAGACAAAACCGACTGTTTACGTGAATACTCAACAAGACATTTTTAGAAAGAAGTCGCGAAAGAGAACTCAATTCGGTGCTGAGATGCAGCTCTAAATGCACAGAAAACAGCAAATTGAATTCTCTTGCGCATCTTTTGGCGCTTGAATGTTTACATTTATAAGAGCTTTGGTCCCTTCCAATGATACATTTTAAAGCTGGGATTTGTGTATCGAAATATCATAATTTTAACACTATACACACACACACACACACACACACACACACATATATATATATATCGTTTACTGATAGAACTATATATACAGATTATTATACTATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATACATATATTGTAACGAATGGAGGAACTGATAAAACTCACTTAACAGCTTAGACAGGAAAGAACACATGCACTTAGATTTATCCGAACAGAACATAAAACACTCTTTAGACTTGCTACAATATATATATATATATATATATATATATATATATATATATATAGTTCTAACAGTAAACGATAACAATAATGTTCAAATTTAAACAACACACTTGTGCATGATAATAAGGTTCTTGGAAACATTACCCAAGCAAAACCTCCTTCTGATTTATTATGTTGCCAGACGAGGAATCAGCGACATCCAGCGGTTGATACGAGTTATTAGGTGCGTCCGAATTCGCGTACTTAACCACTATTCTATGAATAGTGCAAGTAGTGTGTTCACACTGAAAATTCCAAAAAGAAAAAGTGCATATTAAATAAACGTAAAAAACGAAGCGTGGAATGTTGGACACTTCATGCACTCAACTGTCGCAGCTTTAATTACGTAGCGGAGGGGGAGGGGGATCAGATTCCGATGTTTAATGACAAAATAAACGTATAAAATTCACACACTACACAGATGAGTACATAGGGCATAACTACATAGTGTATAAGTGCATAGTGTATAGTGCGTCATTTGAGACGCAACTATTGTTCCTCCAGAGTGACGCGCAGCTCAAGCAGGAAGTGATCTCGTTCACGTGTGTTTGTGTTGTTCTGTTTTGCCGCCCTGAAGCAAACTCACTTAACTTACACGAGCTGTCAACTTTTAATCATTTCTGATGTAAGCAACAGAGACAAATTATGTCTTCCGATACTTCCACTGTTGGAGGGATTCAGGGTTATCTCCTAAAGCTTCATTCATTCCTTGGAGAGACAGAGAATAGGAATGCTGCTATAGTCTGCCATGACATTATTGGAGACTTGGGCCAGGAATGCATGATAACTAAGAATGAGAATGAATTGGTTTTACAGACATCTTTGCTTTTTGCAAAGGAAGAGGGATTGCTTAGCTTTCTCCGAAAGTCTCTCTCTAATGAAACGCTGCGGGATACAAGAGTGGAGATTCTCAATTTTTTAGGGGCATTTCTACAGAGAATCTCAGTCACTGTCCGAGGATGGGAGAAGAACTATGCTGTCGACCTTAAGGACATCTGTATGGTTGTCTACACAAAGGACAAAGCTGCAAAGTGCCGAAGCCCTGCTTTAGATCTCCTAATCAAAATACTGTATCTCACGAAAGACTCCAGCATCACCCAGGATCTCAAAGTTGGGGATATGTTCAACAAATTTTTCGGAGAGTTAAGTCAGAAGATGCTGGGTTACATTTATGAACTTCTTGGAGTGCTGGGTGAAGTGCACCCCAGTGAGATGGTCAACAACTCTGAAAAACTCTACAAGGCCTACCTGGGTGAACTGAAAGGACAGATGACATCTACTACAAAGGAACCAAAACTTCCTCTTGTTGCTGGCTGCCTGAAAGGAATCACCGCTCTGATGGTGAACTTCACCAAATCAATGGAAGAAGACCCGGTTATGTCAAAAGAAATCTTTAATTATGCGCTAAAGGCGATTTGTCCACAGACTGATATGAAAAGATATGCAGTCATCTTTGCCGGTCTCAAACTGTTTGCTAAGCACTCAAGCCAGTTTGGCAATTGTCTCATGGATCATTACATGTCTATCTTTGATGTCATGTCCAAACTTTGTGGACATATAAATGGAGAGCTGAAAAAGAGTAGTTACACAGCACTAGAGTCTTTCCTAAAACAGGTGGCCACTCTTGTGGCAGAGAACATTGAGTTGCACAAAAGCAAGCTGAAGTTCTTCATGCAGAAGTTCTGTGCTATCATCAGGACCATGGAATCCACTAATAAAGAACTGTCCATTGCTATCAGAGGATACGGCCTGTTTGCTGCGCCATGCAAGGTGGTGTGCCCTCAGGATGTAGATCTGATGTATACAGAGCTCATTCAGCGGTGCAAGCAGATGTACCTGACTGAGTCTGACCGGGATGATGACAATGTCTACCAGCTGCCAAGCTTCCTCGACTCCATAGCTAGTGTTCTGATACACCTTGACCGGATTCCTGAAGTGTACACGCCCGTGCTAGAGCGCCTCCTTGTGGTTCAGATGGACAGCTTCCCTCAGTACAGCCAGAGAATGCAGTATGCCACCTGCCGCTCCATCATCAAGGTGTTTGTTGCCATGGCAGTTCGAGGTCCAGTCCTCTGGAGTTTCACTAGTTCTGTGGGTAAGGATGAACTGGAGGAGCGGATCATTCCTTCAGATGGTTCTCAAGCTGAGGAGGATTCCACCCTGGTGCGCTCTGGGAAATGGAAAGTTCCTTCCTCTAAGGACTACCTTGACCTCTTTAAGGGGCTTCTGGACTGTGAAAACTTTAAAGACACAGGATTCATGGATGGAGCTCCAGCTGCCAAGAACTACAACCTGAGAGACATAAACCGACACTTATATGACGCACTGGTGCAGTCAGTCATGAAGATTGTGGAGAAACTCGATCTTTCAGTGCAGAAAGTCAGTGCAGCAGATGAGGCACAGAGTGATGCAAGTGCTGAATTTATGCCTTCATCTGACCCCACAGCAAACCTGATACCCAACAAACCCAAAGACTTTATTGCCTTTATCAACTTGGTTGACTTTTGCAGTGACCTATTGCCTTCAAGAAATCCTGAGTATTTTGCCCAGTGGATGCATCCCCTGTGTCACGAGCTCATTCTGCAGTCAATACATTTCCCTCTGGTCAGCGGCTTTTATAAGCTCCTCTCCCTGTCTATGAGAATTGCCAAGAAAATCCACTATTTTCAGGACCTAAAACAAGGGCCTAAAAGTGTTGGTGGTGGCTCCACCATGGAGAATGCCTGTTTTTCGCTCCTTGCAAAGTTTGGAAAGGAGGTTTGTGTACGTATGAAACAATATAAAGATGAGCTCCTGGCTGCCTGTCTGATGTTCATCCTCTCTCTTCATCCTGACATGGTGGCTCTGGATATCAAGGCATATATCCCAGCTCTGCAGGCTGCTCTGCGGCTGGGTTTGAGTCATGCTCCTCTAGCCACAGCAGCACTGGATGCTCTGGAGTCCTGGTCTTCTCTGATCCCTGCTGCCATCATGCAGCCGCACTATGGAGACATACTGCCACATTTAGATGGCTACCTCAAAACAACCAGTAACTCTGAAAAAGATGACGGCAGTATGGAAGTGACGTTTGTGTCAACGGGAAGTTCTAAAAGTTATGGGAAAGTCATGTTGAGACTCCTGAAGAAATCAAAGCACCTGTCTGTGGGAGATGAGTCTCCGATTGCTGCTGTGAGACGCAGGGTGGCAGTACTTGTTAATTTTGCTTGCTTATTTTGCACTTTCTTGTATCTAACCCCAGCTGTTTCTGCGGAGGACATGATGAAACGTTTTGTGGCATGGGACTGTGAGAAGAGGCTGAGTTTTGCTGTACCTTTTAAAGACATAAAGCCTGTGATCTACCTGGACTCCTTCCTGCCAAGGGTCACAGAGCTCGCACTGTCCTCCAGTGACAGACAAACTAAAGTTGCAGCGTGTGAGCTTCTGCACAGTCTGGTCATATACATGGTGGGTAAAGGAGCCCAGATGACAGAAGATGACAAGTCTGCTCCTCCCATGTACAACCTACACAGAAAAGTCTTTCCTGTTCTTCTACGCCTGGCCTGTGACGTCGACCAGGTGACGAGGCAACTGTTTGAACCTCTAGTAATGCAGCTTATCCACTGGTTCACCAACAACAGAAAGTTTGAGAGCCAAGACACAGTGGCAGTGCTGGAGGCCATTTTGGATGGAATTGTGGATCCGTTAGACAGTACCCTCCGAGACTTCAGTGGCACCTGTATCCAGGAATTTGTCAAATGGTCCATTAAACAGACCACCCCCAAACAGCAGGAAAAGAGCCCAGCCAACATAAAATCTCTCTTCAAACGTATCTACAGCCTGGCCTTACACCCCAACGTCTTCAAGAGGCTTGGAGCTGCGCTTGCCTTTAACAGCATGTACAGGCAGTTCAGGGAAGAGAGCTCTTTGGTGGAGCAGTTTGTTTTTGAGGTGCTGGTGGTGTTTGTTGAGAGTCTGGCTCTGGCCCACTTTGATGAAAAATCCCTGGGAACTGTCCAACAGTGTTGTAGTTCCCTGGATCATCTGAAGAGAATTATCAAGCACAAGGCAGACTCGCTCAATAAGCATTCCAAGAGACGCATACCCAGAGGATTCCCTCCAGACCAGTCAGTGTCCTTGTCAGATGTAGTCATGTGGCTGCTGACTCAGTGTGGAAGACCACAGACTGAGTGCCGACACAAAAGCATGGAGCTCTTCTATGAATTTGTGCCTCTGCTGCCAGGTAATGCATCTCCTGCGGCGTGGCTGGATGAACAAGTGAAGCAGCGTGGTCCAGGTTTTCTCATTTCGTGTTTAGAGGGAGGCGGTTTACTCTCTCAGCCTACTTTGAGAGAGGTTGAAGCCCCCTTTAGCATCAGAGGCACCTTGCAATGGATGGATCTGCTGCTGGCTGCTCTTGACTGCTACAGCACCTTCACAAAACTGCACTGTGTGCAACCCCAGAGGATCCTCGAGCTGTCCATGCAGGACGTTCAGGCTGCCAGAGCTTGCTTCAGGATAGCTAATGCAGGTCAGTCACACTTCAGCCCTCGTGAGACAGAGCAGTACAACTACAGCAAGTGCTCCATCATTGTCCGATTGCTGGAGTTCTCCACCATGGTGATAAAGAAATGTCCACAGGATCTCTGGAAGTTAATGGAGCAGTATGTTTTCAACTCTACCTTCTTTACACTGGTGGCACTGACGGTGTGTGAGCCCTCTTCCATTGGGTTCAACATGGCAGATCTAGAAGTGATAACTCAGCTGCCAGAAGTGTGCACTCCTTTACTTAAAGTTTTGGCATCATCGCCTTACAGGACACAACTGGAGAGCAGCATTAGGAAGAGAATAACCGTACAGAGTGTGGAGGAGTTGTGTGCTATTGATCTGTATGAGGCAGACACCAGAGACAGTCATGCTAGCATGCATCTTTTACTCTCAGCCTGTAAGCAGCTCCACCAGTCTGGGCTGCTGAACTCCATTCTGCACAGTCAGAGTGAACAGACGGTTGGCCTTTTGCTGAACACCATTACACTCTCCGTCCCTCTCTCTGGCAGTCTGAATCCTCACTTCCTCAGCTTCTCTCACGGAGAGTACTTCTACAGCCTCTTCCAGATGTCTCTCAATACCGAGTTACTCTGCAGTGTGGAGTGCACAGTGCCGCTGCTGCTGGCTGCAGCCAACCAGAACCCCAGCATGGTTAGTGTTTTGCTGAACGGCATGTTGGATCATAGTTTCCGTGAGCGTTCTGTTAGAAAGTCCCAAGGCTCGCAATTGGCTGAACAGGTGCTCAAGGAGTGGGATTTGCTCAGGCCATGGTGGGAGGGTCCTGCAGCCTCACCAGAGAGCAAAACTTCAGTTCTGTCATTGCTCGCCAAAGTGCTCCAGAGCCAGGCTCTAATCATGCTGCCCTTCTTCACTGCATTACCCAGCATGCCACTGGAGGAGCTCAGGAGGGCTCTGGAGAAGCTGGTGGCTACACATTTCCCTATGCAGTCAGATGAATTCCCTCGCGGATCACTTCAGTGCAACAACTACATGGACTGCATTCGCAAATTTTTAGAGGCCCTGCAGCTGTCTCAGAGTCCTGTGTTATTGAAGCTCATGGCTAGAGTTCTGTGCCGGGACAAAAAACATATCATGGAAGAGCTCTTTCAGACCTGCTTTCAAAATATTGCTCGCCAGTCCCAATTGGAAAGACAGGTTCTTCTCCTCAGCTCTATCTACCAGTCATTTCAAGCCAAAGATGTTCCTTCAAACTCCATGCTCATGGGTCTTATAGACCGAGTCCTGCTACTACTGGCCTCTTACTGTAGCCCTCAGGCACTCTCTCAGTTCTTCATCACTAATATTGCCGATATCATGACTACTCTACAGGCACGCTTCACTAAGTCTGTTGAGTCAGTGTTTGAGAGTCAGATCATGATGAAGATTGGCTGTTGTAAGCTGTTGGAGGTGTTATACTCTCGTCTGCCTAAAGAAGAAGTCTATTCTAAAAACTCAGCCATCAACCAGGCCTTCTGTGGCACAGACAGTGCAGAAGGCAATGAGCTTTCCAAGAACCTCCTCAAATTGTGTTTTGAGGCCTACACTGAAAACATGGCAGGAGAGACGGTTCAGCTGGAGCTGAGGAGAGAGTACCACTGTGCTGCTTATAACTGTGCCATCGCCCTGATCAGCTGCAGCTTCAACGAGACCAAGTTCTATCAGGGCTTCCTTTTCACTGAGAAACCTGACAAGAATCAGTTCATATTTGACAACCTCATTGATACACAAAGGGTGTACAACTTTCCTATAGAGATTGATGTCCCTATTGAGAGGAAAAAGAAATATGTCATGATCAGGAAAGAAGTGAGTGGAGAAAACGGAGGTGCACCTGTATACCTCTCCTCCCAGTCCTATATGGCAGACAGCAGTCTCAGTGAGGAGATGAGTCAGTTTGACTTCTCCACTGGAGTTCAGAGCTTCTCCTACAACTCCCAGAATCCTTCAGGCGAGGGCAGCTCCAGCAGGACTCGAGAGCGTAAGGAGGTTGTGTCTCAAGATGAGACTGTGGAGCTGGAGATGGATGAGCTGAATCAGCATGAGTGTATGGCCAATATGACGGCACTGCTGCGCCACATGCAAAGGAACAACATCACTCCTAAAATAGAGGAGGGTGTGACACCTAGTGTTCTTCCTCCCTGGATGAAGTTCCTCCAGGGGAAGCTGGACAATCCATCCACCCCCCTGAACATTAGACTCTTCATAGCCAAACTTATCATCAATACCGAAGAGGTACTGCTTCGGCATTTTTATACCTTTGGATTCATTGTTATGTTGTATATGTATTCTTTTATTGTACATCTATATGTCCAGATATTTCATCCATATGCGAAGCATTGGCTGGGCCCACTGGTGCAGCTGGTGGTTTCCAGTAGCAATGGAGGAGAGGGCATTCACTTTATGGTAGTGGACATTGTGGTGACTGTCCTCTCATGGGCCAGTGTGACCACACCAAAAGGTAGCACAAGAGATGAAGTTTTGGCCAATAGGCTTCTTGGGTTTCTGGTTAAGAACTGCTTCCACACCAAACGGGCCGTTTTCCGCCACAATCTGGAGATTATCCGCACAGTTGTGGAATGCTGGAAGGACTGCCTCACAATACCCTACGATTTGATATATGAACGGTTTGCTGGAACAGATCCCAACAGCAAGGATAACTCTGTTGGAATACAACTTTTAGGTATTGTAATGGCCAACAGTCTTAATCCTTATGATGCTGCATGTGGCATTGAGCATGACAGATACTTTCAGTCACTGGCCAACAACTTGTCATTCATCAGATATAAGGAGGTGTACTCAGCAGCTGCTGAGATCATTGGGTTAATCCTAAACTACATGACTGAGCGAGAAAATCAAAATGAAGGGCCCTTATTGAATATCACTGTTACAAAGCTCATGGATTTGAGAAAGAAGGAGGTGGATGACAAATTTATTGTTTGCCTAAGCAAAGTGTCCAAACACTTCCCACCTTTGGTGGATCGATTCGTAAATCCTGTTTTTTATTTGCTGCCAAAGCTGCATGGCATGTTGAAGACACACTGCCTTGAATGTGTGCTGAGTCGTGCTGATGTCATCCCTGAAATCTACCTGCACCTGAAGACCAAAGGCCTCTCACAGATCATGAGCCACAAAGATGAAGCCAGACAGCGTGTTTGTCTGGACATCATACATAAGATCCTGGCATGTCTGAAGCCAGAAGAGCTAAAGGAGATTTTGGGAAGTGTCACAGCATTTGTGTCTCACCCTTCTCCTGTCTGCAGAGAGAGAATGTATGACATCCTGATGTGGATCCAGGACAACTACAGGCTTTATGTGCGTAATTTCTGGAGTCATGAGAGCCGTTTACCTCCAGACACTCTGGAGCGCATGCTTGTTGTGCTGAAGTCTCTGTATTCATCCCGCATTGAAGAACAGTTCCTCAGTCTGGCCACTGACCTGCTACTCGAGATGACCAGTCACAGCCCTGACTTCACACGCAACATGTTTGAGTTCCCACTCTCTGAGTGCAAGTTCCAGGACTACACAATAGACTCTAACTGGCGTTTGCGGAGTACGGTCCTCACGCCGATGTTTATGGAGACCCAAGCCACCCAGGGCTCTGGCACTCAGGGTCCAGAGGCTGCAGGAAGCCAGGCAGCCACAATGAGGGGTCAGATCAGGGCCACACAGACGTCCCTGGAGTTCTCTCAGACTCTAGCTCCTGGTGCAGGACGCCGTTCAGCATATAACTGGTTAACCGGGAGTAGTGTGGACACACTGGCTGATTATTCCCTTTCATCTGATTCTTTATCGTCACTCTTGGTGTTTGAGAAAAAGAGATCAGAGCGCCCCCAAGCTGCCTGGAGAGCTGTGGGTGCAGGGTTTGGCTCTAAACGCCTCACCTCTGCTAGTGACGAGACAGACAGTCGAAGTGCAGCTGAGCGGGAGCGGCGCGCAGACATTCTGAGGCTAAGGAGGAGATTTCTAAAGGATAAAGAAAAGGAGAACATCAGATTCGCCAAGAAAGAAATTCAATCCCAAAGAACAGAAAGGAAGAGAAGAGCAGATCTGAAGATCCGTCAGGATGCTCAGGTCACGCTGTACCGCAGCTACAGAGTTGGAGATCTTCCTGATATTCAGATTCAGTACAGCAGCCTCATTGCCCCACTACAGGCTCTGGCACAGAGGGATGCCACACTGGCGAAGCAGCTGTTCAGCTCACTGTTTGCTGGGGTGCTGGTTGAAATGGAGAAATCCAAGTCTAATAAAGAAACAGGCAACATTCTGAAGGATCTAGTGCAGACCCTGAACACCTTCCTCAATATGAGCACTGCCTACTTCCCCCCTTTCATTTCTTGTGTGCAGGATATGAGTTATCATCATAAGGCCCTTCTTGGTGTTGAGCCGGCTCTTGTCAGTGCCAGCTGTCTCGCCAGTCTGCAGCAGCCCATGGGCATCCTGTTACTAGAGGAGAGTTTGCTTCATGGCACTGGAACGTCAGAGGAACCTCCCTCAAAACGAGCACGAGGCAAACGAGAGCTGCCACCTGACACAGAAAGATGGATCCACCTCGCCAAACTTTACAGGTCTTTGGGAGATTATGATGTAGTCAGGGGAATCTTTAGCGGCAAGATTGGTACAAAGTCAATAACATTCACGGCCCTGCAAGCAGAGGCAAAGAGTGATTATGCTGAAGCTGTGAAGCTCTACAATGAGGCTCTGAATAAAGATGACTGGAATGATGGAGAGCCCTCAAACACAGAGAAAGATTTCTGGGAGATTGCTGCGCTAGAGGCCTATAATCACCTGACAGAGTGGAAATCTCTGCAGTACTGTGCCACAGTCAACATTGACGACAACTCCCCCGTCAATCTAGAAAAAATGTGGACAGAGCCGTTTTATGTGGAAACATACCTGCAGTACATGATGCGTAGTATGTTGAAGCAGTTGCAGCTGGGCGAGAGAACTCAGGATCTGCTCAGCTTTGTCGATGCTGCCATGAAGATGGAAGAACACAAGGTCATCATGGAGACCCATTACAGTCAGGAACTGAGTCTACTGTACATCCTGCAAGAAGACTATGACAGGGCCAAATACTATGCCAACAACTGCATGCAAGTCTTCATGCAGAACTACTCAAGTATCGACCCGCTGCTGAACCGCAGCCGCCTGACTGTGCTACAGTCTGTCCAAGCTCTGACGGAGATCCAAGACTTCCTGAATTATATCACTGGAGAGGTCTCAGTGAATTCTCTCAAGAACATGATCAGACGATGGACCAGCCGCTATCCGGATGCTAAACTGGACCCCATGAATGTTTGGGATGACATCATCACTTCTCGTTGTTTCTTCTTGGATAAGATTCTGATGAGGCTGACTTCCACCCCTGAAAACAGCATGGAGGTGGACGGTGCAGAGCAGGCGAGTGGAGAGGAACTCGAAGTGCTGGTCAAGAGCTGCAAATTCAACATGAAACTCCAAATGGCAAACAGTGCATGGAAACAGAATACACATCATTTCAACTCTTGTCACAGTCCAAGTTTCATGATAGATGCATTACTGTATTTTTCAGTGGATGCTGAGAGACAGAGTGAAGGCTCATCTGCTCGGATGCTCCGTGACCAGAAGATCCTTCTGGGCACCACCTATGACCTCATGGCCACTGCTGCAGATCGCAGTCCCTCTGCTCTAGAGACTCTCGGGGAAGAAAAAGTACAGAAGATTCTCCAACTTTCAATGGCCTCATCCGTCACCCAGGTGGTAGAGGGTCTTCAGATGCAGGCTCTGGAGTTGTTGCGAAGTGCTGCACGTAAGGCAGATGAGGAAGAGCAGTCCTTCAGCCAGCAGCATGTGCATACACATGGTATTGTGGAGGCCTACATGACCTTGGTCAACTTCTGTGACCGAAGACTGAGAGAGAGTGAACAGAAAGAAGAGGCAATCAGTTCTAAGCTGCAGTCCTTGCCTGGACATGTAGTGAAGATGATGCTGAAGGCACTGAAGCTCAACTCAGATGAGGCCAGGCTCAAGTTCCCACGTCTACTGCAGCTAGTAGAACTGTACCCCGCAGAAACCATGGACCTGATGGTCAGAGAGATTGTTAGTGTGCCTTGCTGGCTGCTGATTGGCTGGATCAGTCAAATGATGGCTCTGCTTGACAAACCGCAGGCGATGGCAGTTCAGCATGTTATAGAGGAGATCGCAGAATGCTATCCACAAGCCCTCATCTACCCGTACATGATCAGCAGCGAGAGCTACACCTTTGAGGAGTCTGCGAGTGGTCGGAGGAACCGGGAGTTTGTTGAGAAGCTGAAGTCATTACTGGATAAAGGTGGTGTCATTCAAGAGTTTGTAAATGCCCTTCAGCAACTTACTAACCCTGACATGCTTTTCAAGGACTGGTGGAGTGAGTTGAAGAATCAACTGGACAAACCAGACATGGACAAAAAGAAAATGAAGCAGCTCTACGATGAAATGACTGGATTGCTTGGTGATTCAAAGTCTCCAGGACTTGGATCTTTCCGAAGAAAATTCATTCAGAAATACTGTAAAGAAGTGGAGAAGCTGCTTGGTGCTGGTGGGTCCAATTTGTATGAAAGGCGAAAGGATAAGAATTTCCTTCAGCAGGTGGACCACATGGCCATCTCCATGAAAGGTTTCCAGAAGGAACCAGGGAACATGAAGGAATATTCACCTTGGCTCAGCAGCTTTAAAGCAGAAATGCTCAAAAATGAACTGGAGGTACCAGGTCAATATGATGGCAAATCAAAGCCTTTGCCTGAATATCATGCAAAGATCACAGGTTTCGATGAAAGGGTAAAGGTTATGACATCCATTCGACGGCCGAAGCGTATCATCATACGGGGAGATGACGAGCGGGATTATCCGTTCCTAGTGAAGGGCGGGGAGGACCTGCGGCAGGACCAGCGCATTGAGCAGCTCTTTGGCGTGATGAACATGATTCTCAGTCAGGACACTGCCTGTTCTCAGCGGAGCCTGGCACTCCGCACTTACCAGGTCATTCCCATCACCAGCAGGCCCAATGATTTCTATGACGACTGGATCAGCAAAGTTGCTGGGAAGGTTGACGGCATTAGACGATATGCTGAATTGTACAAGAAAGCAAAACGTGTGGACACTGTGAACAACTTTAGGAGACTTGAGCAGATGGTGCCTGATGACTTGTTAAAGCGTGCTTTTGTGAGGATGAGTACCACACCAGAAGCCTTCCTTGCGTTACGGTCCCATTTCAGCAGCTCTCATGCTGTGCTCTGCATCAGTCATTGGATTCTGGGCATTGGTGATCGGCATCTATCTAACTTCATGATCAACACAGAGACGGGCGGCATGATCGGCATCGACTTCGGTCATGCTTTTGGATCAGCCACACAGTTCCTTCCAGTGCCTGAACTGATGCCATTTAGACTGACACGGCAGTTTATGAACTTGATGCGACCCATGGCCGAGTCTGGCCTCATCCAGAGTGTGATGGTACACTCACTGCGAGCCTTCAGAGATGACCCAGACCTGCTGCTCAACACCATGGATGTGTTTGTGAAGGAGCCTTCACTGGACTGGAAGAACTTTGAGCTGAAGCAGCTGAAGAAAGGAGGTACCTGGACAGAGAGTGTGGACACCAAAGAAATAAACTGGTTCCCTCTACAGAAGGTCAGCTTTGCTCGCAGGAAGCTAGAGGGAGCCAATCCCTCGGTTATAACAAGTGAGGAGATTTGTCTCGGATTTGAGAAGACTCCGGAGTATAAGGGCTTGTTGGCTGTTGCTCGAGGCGAAGAACAACACAACATACGAGCTCGACACAATGAGAAAGATCTGAGTGTTGAAGATCAGGTAGATTGCTTGCTCGATCAAGCAACTGACCCTAATATATTGGGCAGGGTGTGGGTAGGATGGGAACCATGGATTTGAACCAAATAGTGGATGACATAATGAAGTCCAGGTAGATGTTTTTTGTATTTTTCAAAATTTTGTAAACCTTTTCTCTCAGTGTGAAGACAAGGCTTTCAGAACCACAGCTACTGTCAAACGACTGTTTTTATAGCAATGTTCAGTTATATTGCATAATGTAATAAGATTACACTATACAGATGTGATGTTTATGAAGGAAAAACTGTAGCACACAGGTGTCAATTTCTATTGCACTGCATTAAAGGCATCCAGTCGTCAAATAAA

Function

symbol description
prkdc Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within B cell differentiation; T cell receptor V(D)J recombination; and immunoglobulin heavy chain V-D-J recombination. Predicted to be located in nucleolus. Predicted to be active in nucleus. Is expressed in kidney and spleen. Used to study severe combined immunodeficiency. Human ortholog(s) of this gene implicated in immunodeficiency 26. Orthologous to human PRKDC (protein kinase, DNA-activated, catalytic subunit).

GO:

id name namespace
GO:0006303 double-strand break repair via nonhomologous end joining biological_process

KEGG:

id description
K06642 PRKDC; DNA-dependent protein kinase catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_12591049_12624688.mRNA True 13795 mRNA 0.45 79 12590785 12626438

Neighbor

gene id symbol gene type direction distance location
CI01000026_12570957_12581387 NA coding downstream 9272 12570795 ~ 12581513 (-)
CI01000026_12536781_12546106 KIF9 coding downstream 44256 12536781 ~ 12546529 (-)
CI01000026_12445673_12447183 NA coding downstream 142084 12445304 ~ 12448701 (-)
CI01000026_12444311_12444646 NA coding downstream 145923 12443976 ~ 12444862 (-)
CI01000026_12358411_12363689 HTR5AB, HTR5A, HTR5AA coding downstream 226586 12357712 ~ 12364199 (-)
CI01000026_12639230_12645878 ASB10, ABCF2B, ABCF2, ABCF2A coding upstream 12507 12638945 ~ 12645878 (-)
CI01000026_12663161_12672818 SMARCD3A, SMARCD3B, SMARCD3 coding upstream 34826 12661264 ~ 12672818 (-)
CI01000026_12712643_12726107 NFX1 coding upstream 86161 12712599 ~ 12726107 (-)
CI01000026_12728675_12752693 NA coding upstream 102151 12728589 ~ 12752693 (-)
CI01000026_12792682_12819124 MALRD1 coding upstream 166244 12792682 ~ 12819124 (-)
G134619 NA non-coding downstream 667 12587948 ~ 12590118 (-)
G134593 NA non-coding downstream 33452 12550311 ~ 12557333 (-)
G134635 NA non-coding downstream 194996 12395475 ~ 12395789 (-)
G134589 NA non-coding downstream 230515 12359897 ~ 12360270 (-)
G134588 NA non-coding downstream 233392 12357049 ~ 12357393 (-)
G134673 NA non-coding upstream 3785 12630223 ~ 12632312 (-)
G134674 NA non-coding upstream 6911 12633349 ~ 12634475 (-)
G134676 NA non-coding upstream 8880 12635318 ~ 12635700 (-)
G134678 NA non-coding upstream 10147 12636585 ~ 12636798 (-)
G134680 NA non-coding upstream 156277 12782715 ~ 12782993 (-)
G133802 NA other downstream 1283604 11301915 ~ 11307181 (-)
G133790 NA other downstream 1753180 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 1800631 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 2241828 10347746 ~ 10351783 (-)
G132721 NA other downstream 3040141 9550030 ~ 9550644 (-)
G136110 NA other upstream 1928479 14554917 ~ 14555436 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 4130291 16756729 ~ 16761341 (-)
G137667 NA other upstream 4179926 16806364 ~ 16808372 (-)
G137914 NA other upstream 4356813 16983251 ~ 16984352 (-)
G137967 NA other upstream 4441910 17068348 ~ 17069433 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034981 prkdc coding NC_007118.7 CM002891.2 41348543 ~ 41396860 (-)
bowfin (Amia calva) AMCG00019348 NA coding CM030124.1 CM030124.1 15632482 ~ 15681330 (-)