G134676


Basic Information

Item Value
gene id G134676
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12635318 ~ 12635700 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU153146
GCATTAGTTGAGAGATTTTTTTTCTTGAGAAAATTTGCCATGTACTGTACCTGATATACAGTATATCCAAAATAACTGATACTGAATCGAATTGCAAGCTTGTGAATCAAAATGCATAACTATGATGACAGACTGGCAGGAAATTATGCAAAACAGAAAAAAAAGTTCAAACAGGGTGATATTGTGACATACTGATTAGCCTAATCTTTCCATTATTGTTAATAATAGTTGCAACCTGCACTCTTAAATGTACATTGAAAATTGTCAGCTGATAAACCATCGGGGACGCGATTATGGGGCCCCCTCCTGGAGATTTGCTTAGGGCCCCCAATAACCTTTGCTCCTTTTGCTCTTTGCTCACAGTGTCCTAATTTATGGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153146 True 383 lncRNA 0.38 1 12635318 12635700

Neighbor

gene id symbol gene type direction distance location
CI01000026_12591049_12624688 PRKDC coding downstream 8880 12590785 ~ 12626438 (-)
CI01000026_12570957_12581387 NA coding downstream 53805 12570795 ~ 12581513 (-)
CI01000026_12536781_12546106 KIF9 coding downstream 88789 12536781 ~ 12546529 (-)
CI01000026_12445673_12447183 NA coding downstream 186617 12445304 ~ 12448701 (-)
CI01000026_12444311_12444646 NA coding downstream 190456 12443976 ~ 12444862 (-)
CI01000026_12639230_12645878 ASB10, ABCF2B, ABCF2, ABCF2A coding upstream 3245 12638945 ~ 12645878 (-)
CI01000026_12663161_12672818 SMARCD3A, SMARCD3B, SMARCD3 coding upstream 25564 12661264 ~ 12672818 (-)
CI01000026_12712643_12726107 NFX1 coding upstream 76899 12712599 ~ 12726107 (-)
CI01000026_12728675_12752693 NA coding upstream 92889 12728589 ~ 12752693 (-)
CI01000026_12792682_12819124 MALRD1 coding upstream 156982 12792682 ~ 12819124 (-)
G134674 NA non-coding downstream 843 12633349 ~ 12634475 (-)
G134673 NA non-coding downstream 3006 12630223 ~ 12632312 (-)
G134619 NA non-coding downstream 45200 12587948 ~ 12590118 (-)
G134593 NA non-coding downstream 77985 12550311 ~ 12557333 (-)
G134635 NA non-coding downstream 239529 12395475 ~ 12395789 (-)
G134678 NA non-coding upstream 885 12636585 ~ 12636798 (-)
G134680 NA non-coding upstream 147015 12782715 ~ 12782993 (-)
G134916 NA non-coding upstream 197486 12833186 ~ 12833432 (-)
G134921 NA non-coding upstream 213653 12849353 ~ 12849780 (-)
G134931 NA non-coding upstream 231551 12867251 ~ 12871739 (-)
G133802 NA other downstream 1328137 11301915 ~ 11307181 (-)
G133790 NA other downstream 1797713 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 1845164 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 2286361 10347746 ~ 10351783 (-)
G132721 NA other downstream 3084674 9550030 ~ 9550644 (-)
G136110 NA other upstream 1919217 14554917 ~ 14555436 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 4121029 16756729 ~ 16761341 (-)
G137667 NA other upstream 4170664 16806364 ~ 16808372 (-)
G137914 NA other upstream 4347551 16983251 ~ 16984352 (-)
G137967 NA other upstream 4432648 17068348 ~ 17069433 (-)

Expression


Co-expression Network