G129069


Basic Information

Item Value
gene id G129069
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2612983 ~ 2613316 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146660
CGGCCCATCACTGTATTGTTGAAAAGTCGTTATTTTGTTTTTTTGGAGCACAAAAAGTATTCTTGTCGCTTTATAATATTAAGATAGAACCACCAAACTCAAATGAACTGTTTTAAATATGTTTTTAGTACCTTTATGGATATTGAGAGTGGAAGTACCATTGCTGTGAATGCAGGCCTCACTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTACAGGTGTAGAACGACATGAGGGTGAGTAATAAATGACATTATTTTAATTTTTGGGTGAACTAACCCTTTTAGCCTTGTCTGTAAAACCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146660 True 334 lncRNA 0.36 1 2612983 2613316

Neighbor

gene id symbol gene type direction distance location
CI01000026_02590701_02596964 SENP3B coding downstream 14451 2590375 ~ 2598532 (-)
CI01000026_02583583_02589420 EIF4A1B, EIF4A1.L, EIF4A1A, EIF4A2.L, IF4A1, EIF4A1, EIF4A2 coding downstream 23437 2582409 ~ 2589546 (-)
CI01000026_02572681_02574646 SOX19B coding downstream 37647 2572506 ~ 2575336 (-)
CI01000026_02558765_02559532 MBLAC1 coding downstream 53341 2558711 ~ 2559642 (-)
CI01000026_02553458_02556601 NA coding downstream 56012 2552981 ~ 2556971 (-)
CI01000026_02621057_02628547 NA coding upstream 6890 2620206 ~ 2629448 (-)
CI01000026_02633084_02640164 PLSCR3B, PLSCR3 coding upstream 19387 2632703 ~ 2640164 (-)
CI01000026_02653022_02656755 PHF23B, PHF23 coding upstream 38329 2651645 ~ 2656755 (-)
CI01000026_02805926_02807292 NA coding upstream 192610 2805926 ~ 2807498 (-)
CI01000026_02846742_02867620 ALX4A, ALX4B, ALX4 coding upstream 232943 2846259 ~ 2867620 (-)
G129068 NA non-coding downstream 126 2612584 ~ 2612857 (-)
G129049 NA non-coding downstream 144980 2467622 ~ 2468003 (-)
G129048 NA non-coding downstream 152134 2460597 ~ 2460849 (-)
G129005 NA non-coding downstream 176938 2434862 ~ 2436045 (-)
G129042 NA non-coding downstream 223847 2388926 ~ 2389136 (-)
G129101 NA non-coding upstream 94495 2707811 ~ 2708057 (-)
G129102 NA non-coding upstream 95230 2708546 ~ 2708877 (-)
G129113 NA non-coding upstream 101925 2715241 ~ 2716583 (-)
G129124 NA non-coding upstream 128758 2742074 ~ 2742410 (-)
G129104 NA non-coding upstream 227220 2840536 ~ 2841556 (-)
G127418 NA other downstream 876877 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 1610394 986182 ~ 1002180 (-)
CI01000026_03439507_03490314 PDE3B other upstream 767469 3438795 ~ 3490503 (-)
G129476 NA other upstream 1057258 3670574 ~ 3670884 (-)
G129658 NA other upstream 1753980 4367296 ~ 4373069 (-)
G129750 NA other upstream 2199734 4785885 ~ 4820249 (-)
G130256 NA other upstream 3662195 6275511 ~ 6317154 (-)

Expression


Co-expression Network