CI01000026_02805926_02807292


Basic Information

Item Value
gene id CI01000026_02805926_02807292
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2805926 ~ 2807498 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_02805926_02807292.mRNA
ACTGGGTCCTGTTCTTCGACTGTGGTTTAACAAAGTCCGGATTAGTTTACATATCCCGGATTGAGCTAGCTCGATATCTGAAATTGAGTTTTGTTCGGTTCTTCCAACAACAATATCTCGGATTTTAATTTCAAGAAGACTTTTGTTTATTAAGAGAACTGAGCGTTCGTGCGAGGATTGAAAAGTTCGTCTAACCAACTATCATCATGGCTAAACAGCGTGCTGCATATTTCAGCCCTGCTGAATTGCAACTTCTAATTGAAGGATATGACGAAGTTAAACATTTAATAAAAACTAAAGGGAATACAATAGCGGCTGCAAAAGTCCGTCAGGACGCGTGGCGAAAAATATCTGTCAAATTAAACGCATCTAACCCTCTGGGACCTAGAAGAACGTGGCAGCAAGTGAAGACGAAATACAAGAACATCGTTCAAAGTGGTAGTGTTTTTGAATTGAATAACTTCAAGGATGCACATAATTTAGCTAACAAGAGAAAGGCTGCCCTGAAGAAGATGGGACTACTCCCAACCAAAGAGGAGTACATAGATGAAGAGGAGCTGCCCCCTGAGAATGATGTGGAAGGTCCCATCATAGAGAGAATAATTGGCGGCTGCTGCTCTGATCCTGGAGATGAGGCTGGCTGCAGCAGTTATGTCAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_02805926_02807292.mRNA True 660 mRNA 0.42 3 2805926 2807498

Neighbor

gene id symbol gene type direction distance location
CI01000026_02653022_02656755 PHF23B, PHF23 coding downstream 149171 2651645 ~ 2656755 (-)
CI01000026_02633084_02640164 PLSCR3B, PLSCR3 coding downstream 165762 2632703 ~ 2640164 (-)
CI01000026_02621057_02628547 NA coding downstream 176478 2620206 ~ 2629448 (-)
CI01000026_02590701_02596964 SENP3B coding downstream 207394 2590375 ~ 2598532 (-)
CI01000026_02583583_02589420 EIF4A1B, EIF4A1.L, EIF4A1A, EIF4A2.L, IF4A1, EIF4A1, EIF4A2 coding downstream 216380 2582409 ~ 2589546 (-)
CI01000026_02846742_02867620 ALX4A, ALX4B, ALX4 coding upstream 38761 2846259 ~ 2867620 (-)
CI01000026_02939243_02946057 NA coding upstream 131280 2938778 ~ 2947243 (-)
CI01000026_03146190_03159300 NA coding upstream 338208 3145706 ~ 3159740 (-)
CI01000026_03309007_03342583 NA coding upstream 501017 3308515 ~ 3342851 (-)
CI01000026_03353132_03359434 NA coding upstream 545072 3352570 ~ 3359492 (-)
G129124 NA non-coding downstream 63516 2742074 ~ 2742410 (-)
G129113 NA non-coding downstream 89343 2715241 ~ 2716583 (-)
G129102 NA non-coding downstream 97049 2708546 ~ 2708877 (-)
G129101 NA non-coding downstream 97869 2707811 ~ 2708057 (-)
G129069 NA non-coding downstream 192610 2612983 ~ 2613316 (-)
G129104 NA non-coding upstream 33038 2840536 ~ 2841556 (-)
G129179 NA non-coding upstream 62480 2869978 ~ 2870239 (-)
G129180 NA non-coding upstream 62951 2870449 ~ 2870670 (-)
G129184 NA non-coding upstream 77764 2885262 ~ 2885474 (-)
G129195 NA non-coding upstream 105176 2912674 ~ 2912880 (-)
G127418 NA other downstream 1069820 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 1803337 986182 ~ 1002180 (-)
CI01000026_03439507_03490314 PDE3B other upstream 573287 3438795 ~ 3490503 (-)
G129476 NA other upstream 863076 3670574 ~ 3670884 (-)
G129658 NA other upstream 1559798 4367296 ~ 4373069 (-)
G129750 NA other upstream 2005552 4785885 ~ 4820249 (-)
G130256 NA other upstream 3468013 6275511 ~ 6317154 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034770 si:ch211-107p11.3 coding NC_007118.7 CM002891.2 26841136 ~ 26844064 (-)