G128129


Basic Information

Item Value
gene id G128129
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 4473678 ~ 4477775 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145588
TAAAAAAACAAGACAGGCTCCACTCTTCTATGATGGTGGCAGAATACTCACTTGGAAGATGGGAAAGGCAGCGGTGGGATCTCGTTGTTGATGCCATCACAGTATCGTTCCAGAAACGAGCGGAGGTGAGAGAAAGTGCTTTCTTCCAGGTCCACACAGTAGGGTCTATGCCAGGCCACCACCTGCCTGTCTCTTGGGAGGGCAGTCCATGCCAGGCTGTGGGAGGTGCCAGCAGAGATCTGCTGAATGGCCACTCCATCTAAACCAATCACCTTCTTGGGTTTGGTGATGGGGCCGGTGGAATTCCCTTGACCGCACTGTCCCATGGAGTTATTACCCCAGGCATACACTTCATTGTCATGTGATAAAGCAAGGCAGTGGCTGTCTCCTATAGAGATGTCTACTATTCTGGTTGTGGCAAGTTCCTCGATCAGCTTTGGCCTTAGAGCTGTGGCCTCCGATGAACCACAGCCAAGACACGCACCACAGCCCCAAGCGTACACCTGACCAGTAGAGGTGAGAGCCAGAGATGACTGGCTGCCAGCACATACTTTGCGTATGAACATTCCCTGGAGCGCCTCTACCACCTTGGGTTTATACACACGATTGGTGTCACCATGACCTAGTTTCCCATTGTCTCCACCTCCAAAAGACCAGACTGTACGTCCGTCTTTAGACAGCGCAATGGTGTGGGAGCTTCCACAGGACACCTCACCCACATTACTGATGTCTTTAACTAGTGTGGGAATGTTCCTACTGTTACTGTCACCATGACCTAATCTGCCAAAGTCGCCCTCTCCCCAAGTGTAGAGTTCTCCGTCCTCACTGACTGCAGCACTGTGTCTATATCCTGCTGAAACACAAACCACCACCTTTCCTTGTAGAGGGCCCTGTATTAGTTTGGGGTATTTCTGGGTAGAGCTGTTGCCATGACCCAGTTTGCCATAATCTCCATCACCCCAACTGAACACCTCCCCCTCACTGGTGAAGGCTAACGTGTGGCCATCTGAGCCTTTGGATGATGATACTTTCTTAATGGCACGGTGAGGTTCAAAGGTCAGCTTTTTAAGAGTGGACTGGTTGTTTGAGTCACCCAATCCCAGGCGACCATAGCTGCCCTTTCCACATGCTCGGACTGAACCATCAGAGGAGATGACGAATGTGCAGTATTGGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145588 True 1177 lncRNA 0.51 7 4473678 4477775

Neighbor

gene id symbol gene type direction distance location
CI01000026_04424762_04428710 APH1B coding upstream 44968 4424762 ~ 4428710 (+)
CI01000026_04418614_04423755 NA coding upstream 49363 4418075 ~ 4424315 (+)
CI01000026_04414146_04416156 TMPPE coding upstream 56991 4413230 ~ 4416687 (+)
CI01000026_04412437_04412814 NA coding upstream 60824 4412204 ~ 4412878 (+)
CI01000026_04407023_04410714 GNAO1B, GNAO1, GNAO1A, GNA0, GNAO1.L coding upstream 61805 4406569 ~ 4411873 (+)
CI01000026_04497986_04501262 NA coding downstream 20151 4497926 ~ 4501699 (+)
CI01000026_04503901_04507434 RAB8B coding downstream 26126 4503901 ~ 4508693 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A coding downstream 78180 4555776 ~ 4557613 (+)
CI01000026_04593208_04599259 ITLN4 coding downstream 115355 4593130 ~ 4599537 (+)
CI01000026_04773209_04807191 TLN2A, TLN2 coding downstream 294084 4771859 ~ 4807562 (+)
G128115 NA non-coding upstream 7560 4462197 ~ 4466118 (+)
G128125 NA non-coding upstream 18444 4453203 ~ 4455234 (+)
G128117 NA non-coding upstream 34406 4432095 ~ 4439272 (+)
G128175 NA non-coding upstream 190067 4283412 ~ 4283611 (+)
G128192 NA non-coding downstream 37572 4515347 ~ 4515611 (+)
G128193 NA non-coding downstream 38745 4516520 ~ 4516747 (+)
G128199 NA non-coding downstream 71159 4548934 ~ 4549177 (+)
G128213 NA non-coding downstream 114621 4592396 ~ 4592772 (+)
G128218 NA non-coding downstream 147609 4625384 ~ 4627464 (+)
G128137 NA other upstream 42477 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 141593 4327206 ~ 4332085 (+)
G127979 NA other upstream 710692 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 1812849 2658605 ~ 2660829 (+)
G127519 NA other upstream 2046672 2393683 ~ 2427006 (+)
G128585 NA other downstream 1472038 5949813 ~ 5950122 (+)
G128601 NA other downstream 1506104 5983879 ~ 5991761 (+)
G128757 NA other downstream 1848421 6326196 ~ 6326785 (+)
G130552 NA other downstream 2617278 7095053 ~ 7096652 (+)

Expression


Co-expression Network