Gene
RNA
| Item | Value |
|---|---|
| gene id | G128115 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 4462197 ~ 4466118 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU145571 | True | 977 | lncRNA | 0.54 | 6 | 4462197 | 4466118 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_04424762_04428710 | APH1B | coding | upstream | 33487 | 4424762 ~ 4428710 (+) |
| CI01000026_04418614_04423755 | NA | coding | upstream | 37882 | 4418075 ~ 4424315 (+) |
| CI01000026_04414146_04416156 | TMPPE | coding | upstream | 45510 | 4413230 ~ 4416687 (+) |
| CI01000026_04412437_04412814 | NA | coding | upstream | 49343 | 4412204 ~ 4412878 (+) |
| CI01000026_04407023_04410714 | GNAO1B, GNAO1, GNAO1A, GNA0, GNAO1.L | coding | upstream | 50324 | 4406569 ~ 4411873 (+) |
| CI01000026_04497986_04501262 | NA | coding | downstream | 31808 | 4497926 ~ 4501699 (+) |
| CI01000026_04503901_04507434 | RAB8B | coding | downstream | 37783 | 4503901 ~ 4508693 (+) |
| CI01000026_04556074_04556964 | FOXB1B, FOXB1, FOXB1A | coding | downstream | 89837 | 4555776 ~ 4557613 (+) |
| CI01000026_04593208_04599259 | ITLN4 | coding | downstream | 127012 | 4593130 ~ 4599537 (+) |
| CI01000026_04773209_04807191 | TLN2A, TLN2 | coding | downstream | 305741 | 4771859 ~ 4807562 (+) |
| G128125 | NA | non-coding | upstream | 6963 | 4453203 ~ 4455234 (+) |
| G128117 | NA | non-coding | upstream | 22925 | 4432095 ~ 4439272 (+) |
| G128175 | NA | non-coding | upstream | 178586 | 4283412 ~ 4283611 (+) |
| G128162 | NA | non-coding | upstream | 190751 | 4271179 ~ 4271446 (+) |
| G128129 | NA | non-coding | downstream | 7560 | 4473678 ~ 4477775 (+) |
| G128192 | NA | non-coding | downstream | 49229 | 4515347 ~ 4515611 (+) |
| G128193 | NA | non-coding | downstream | 50402 | 4516520 ~ 4516747 (+) |
| G128199 | NA | non-coding | downstream | 82816 | 4548934 ~ 4549177 (+) |
| G128213 | NA | non-coding | downstream | 126278 | 4592396 ~ 4592772 (+) |
| G128137 | NA | other | upstream | 30996 | 4430562 ~ 4431201 (+) |
| CI01000026_04327206_04331151 | DOK4, DOK5 | other | upstream | 130112 | 4327206 ~ 4332085 (+) |
| G127979 | NA | other | upstream | 699211 | 3752551 ~ 3762986 (+) |
| CI01000026_02659356_02660297 | NA | other | upstream | 1801368 | 2658605 ~ 2660829 (+) |
| G127519 | NA | other | upstream | 2035191 | 2393683 ~ 2427006 (+) |
| G128585 | NA | other | downstream | 1483695 | 5949813 ~ 5950122 (+) |
| G128601 | NA | other | downstream | 1517761 | 5983879 ~ 5991761 (+) |
| G128757 | NA | other | downstream | 1860078 | 6326196 ~ 6326785 (+) |
| G130552 | NA | other | downstream | 2628935 | 7095053 ~ 7096652 (+) |
