G128162


Basic Information

Item Value
gene id G128162
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 4271179 ~ 4271446 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145621
CTGATGGCTCAGTGAGGCCTGCATTGACAGCAAGATCATTAACACTGTCAATGCCCAGAAAGCTACTAAAAACATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATGTTACGAAGCGACAAGAATACTTTTTGTGCTCCAAAAAACAAAATAACAACTTTATTCAACAATATCTAGTGATGGGCGATTTCAAAACACTGCTTCATGAAGCTTCGAAGCTTTTGTTTCGAATCAGTGGTTCGGATCGCGTATCAAACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145621 True 268 lncRNA 0.38 1 4271179 4271446

Neighbor

gene id symbol gene type direction distance location
CI01000026_04209762_04249320 CCDC102A coding upstream 20882 4209392 ~ 4250297 (+)
CI01000026_04172127_04176264 NA coding upstream 94751 4171889 ~ 4176428 (+)
CI01000026_04062224_04065987 SLC7A6OS coding upstream 204751 4062224 ~ 4066428 (+)
CI01000026_03725294_03727306 NA coding upstream 543768 3725294 ~ 3727411 (+)
CI01000026_03664983_03686916 TUB coding upstream 583833 3664983 ~ 3687346 (+)
CI01000026_04327206_04331151 DOK4, DOK5 coding downstream 55760 4327206 ~ 4332085 (+)
CI01000026_04333601_04341386 NA coding downstream 62155 4333601 ~ 4341491 (+)
CI01000026_04344703_04357534 GFOD2, COG4 coding downstream 73257 4344703 ~ 4357660 (+)
CI01000026_04361551_04365574 GFOD2 coding downstream 89615 4361061 ~ 4366072 (+)
CI01000026_04367338_04389547 NA coding downstream 95695 4367141 ~ 4389639 (+)
G128156 NA non-coding upstream 10889 4260063 ~ 4260290 (+)
G128084 NA non-coding upstream 107163 4140151 ~ 4164016 (+)
G128079 NA non-coding upstream 111290 4132956 ~ 4159889 (+)
G128082 NA non-coding upstream 143780 4124760 ~ 4127399 (+)
G128097 NA non-coding upstream 152998 4112623 ~ 4118181 (+)
G128175 NA non-coding downstream 11966 4283412 ~ 4283611 (+)
CI01000026_04412437_04412814 NA non-coding downstream 140903 4412204 ~ 4412878 (+)
G128117 NA non-coding downstream 160649 4432095 ~ 4439272 (+)
G128125 NA non-coding downstream 181757 4453203 ~ 4455234 (+)
G128115 NA non-coding downstream 190751 4462197 ~ 4466118 (+)
G127979 NA other upstream 508193 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 1610350 2658605 ~ 2660829 (+)
G127519 NA other upstream 1844173 2393683 ~ 2427006 (+)
G127531 NA other upstream 1959044 2309322 ~ 2312135 (+)
G127500 NA other upstream 2324740 1931183 ~ 1946439 (+)
G128137 NA other downstream 159116 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 284330 4555776 ~ 4557613 (+)
G128585 NA other downstream 1678367 5949813 ~ 5950122 (+)
G128601 NA other downstream 1712433 5983879 ~ 5991761 (+)

Expression


Co-expression Network