CI01000026_03725294_03727306


Basic Information

Item Value
gene id CI01000026_03725294_03727306
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 3725294 ~ 3727411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_03725294_03727306.mRNA
GACGAACGGTGTCTCTCATGTTCCTCTGGGGTGTCAGAGAATATTATCAGTATCCAGATTTCAAATCAAGTACGGAAAACCATCTGGAACCTGTCAGAGCTGGAAAGATTCCTCAAGATTGGGAAGGGCATATGCGTCCTTTACCGTCTGGAGGTTTAACTTTCTATAATCTATACATAGCCGCACATCTCCGTTCTTCTTTCTCACCACCACTATGGGGCACTGCAACGGAACCTTCCACAACTACAGTCTGGTCTGCAGCCATGACCTCAGGTATTTACTCTTTAACCGCACATGACCAAGAACGCCACTTGTGTTTTATTTCCGTCTTGTCTCAAGTGTCCTCAGAACCACTCTGTAACCAAATGAAGATGGTTGCGGGTATTAAGTCACTCACTAATGGACCAGAGAAATACAATCAGAAGACTGCACGGTACATAAGGGGAGGCAGCGGTGATACTGAGCAAAAGGCAGAGACAGAAGGCACGCGCAACCAAAATGGTGTCAGCGAACAGCAGTGAACACTCAATACGCCATGCGGTCTGACATAATCACACTGCAAATGAACAATCCAACTCATACAATATCACAATACAACATCATTTTGTCTCGTATGCATGAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_03725294_03727306.mRNA True 626 mRNA 0.45 5 3725294 3727411

Neighbor

gene id symbol gene type direction distance location
CI01000026_03664983_03686916 TUB coding upstream 37948 3664983 ~ 3687346 (+)
CI01000026_03554511_03560631 RRAS2, RRAS2.L coding upstream 164379 3554511 ~ 3560915 (+)
CI01000026_03497917_03504607 COPB1, COPB coding upstream 220687 3497917 ~ 3504607 (+)
CI01000026_03429002_03432390 CYP2R1 coding upstream 292234 3429002 ~ 3433060 (+)
CI01000026_03279718_03281541 NA coding upstream 442878 3278858 ~ 3282416 (+)
CI01000026_04062224_04065987 SLC7A6OS coding downstream 334813 4062224 ~ 4066428 (+)
CI01000026_04172127_04176264 NA coding downstream 444478 4171889 ~ 4176428 (+)
CI01000026_04209762_04249320 CCDC102A coding downstream 481981 4209392 ~ 4250297 (+)
CI01000026_04327206_04331151 DOK4, DOK5 coding downstream 599795 4327206 ~ 4332085 (+)
CI01000026_04333601_04341386 NA coding downstream 606190 4333601 ~ 4341491 (+)
G127762 NA non-coding upstream 54413 3670488 ~ 3670881 (+)
G127782 NA non-coding upstream 124095 3600665 ~ 3601199 (+)
G127916 NA non-coding upstream 379111 3345969 ~ 3346183 (+)
G127899 NA non-coding upstream 405558 3319474 ~ 3319736 (+)
G127815 NA non-coding upstream 450647 3274275 ~ 3274647 (+)
G128039 NA non-coding downstream 220410 3947821 ~ 3948061 (+)
G127754 NA non-coding downstream 271053 3998464 ~ 3999564 (+)
G127743 NA non-coding downstream 307446 4034857 ~ 4036844 (+)
G128096 NA non-coding downstream 383810 4111221 ~ 4111425 (+)
G128097 NA non-coding downstream 385212 4112623 ~ 4118181 (+)
CI01000026_02659356_02660297 NA other upstream 1064465 2658605 ~ 2660829 (+)
G127519 NA other upstream 1298288 2393683 ~ 2427006 (+)
G127531 NA other upstream 1413159 2309322 ~ 2312135 (+)
G127500 NA other upstream 1778855 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 2947497 776757 ~ 777830 (+)
G127979 NA other downstream 25140 3752551 ~ 3762986 (+)
G128137 NA other downstream 703151 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 828365 4555776 ~ 4557613 (+)
G128585 NA other downstream 2222402 5949813 ~ 5950122 (+)

Expression


Co-expression Network