G128039


Basic Information

Item Value
gene id G128039
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 3947821 ~ 3948061 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145460
CTGAAATCAAAATTTAAGTTTTTTAGCTTTTAGTATGAATATGTAAGCCTTAATGTTATGAATAAGCTGGTGTGTTCTAAAACAATGACAAAATTCGCATTTAGGAGATATAAGCATTCAAAACTTACAGTCTCTCACTTCCGCTACAATGGATCATGGATTTTCATGACATCACATCACACTTCAGCTTCTTATTAAATCTTCTGTCCAATCAAATGCTCTCTAGAATCTGAAGTCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145460 True 241 lncRNA 0.34 1 3947821 3948061

Neighbor

gene id symbol gene type direction distance location
CI01000026_03725294_03727306 NA coding upstream 220410 3725294 ~ 3727411 (+)
CI01000026_03664983_03686916 TUB coding upstream 260475 3664983 ~ 3687346 (+)
CI01000026_03554511_03560631 RRAS2, RRAS2.L coding upstream 386906 3554511 ~ 3560915 (+)
CI01000026_03497917_03504607 COPB1, COPB coding upstream 443214 3497917 ~ 3504607 (+)
CI01000026_03429002_03432390 CYP2R1 coding upstream 514761 3429002 ~ 3433060 (+)
CI01000026_04062224_04065987 SLC7A6OS coding downstream 114163 4062224 ~ 4066428 (+)
CI01000026_04172127_04176264 NA coding downstream 223828 4171889 ~ 4176428 (+)
CI01000026_04209762_04249320 CCDC102A coding downstream 261331 4209392 ~ 4250297 (+)
CI01000026_04327206_04331151 DOK4, DOK5 coding downstream 379145 4327206 ~ 4332085 (+)
CI01000026_04333601_04341386 NA coding downstream 385540 4333601 ~ 4341491 (+)
G127762 NA non-coding upstream 276940 3670488 ~ 3670881 (+)
G127782 NA non-coding upstream 346622 3600665 ~ 3601199 (+)
G127916 NA non-coding upstream 601638 3345969 ~ 3346183 (+)
G127899 NA non-coding upstream 628085 3319474 ~ 3319736 (+)
G127815 NA non-coding upstream 673174 3274275 ~ 3274647 (+)
G127754 NA non-coding downstream 50403 3998464 ~ 3999564 (+)
G127743 NA non-coding downstream 86796 4034857 ~ 4036844 (+)
G128096 NA non-coding downstream 163160 4111221 ~ 4111425 (+)
G128097 NA non-coding downstream 164562 4112623 ~ 4118181 (+)
G128082 NA non-coding downstream 176699 4124760 ~ 4127399 (+)
G127979 NA other upstream 184835 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 1286992 2658605 ~ 2660829 (+)
G127519 NA other upstream 1520815 2393683 ~ 2427006 (+)
G127531 NA other upstream 1635686 2309322 ~ 2312135 (+)
G127500 NA other upstream 2001382 1931183 ~ 1946439 (+)
G128137 NA other downstream 482501 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 607715 4555776 ~ 4557613 (+)
G128585 NA other downstream 2001752 5949813 ~ 5950122 (+)
G128601 NA other downstream 2035818 5983879 ~ 5991761 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location