Gene
RNA
| Item | Value |
|---|---|
| gene id | G132539 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 9298663 ~ 9298873 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150725 | True | 211 | lncRNA | 0.43 | 1 | 9298663 | 9298873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_09233035_09245301 | FTO | coding | downstream | 53102 | 9232857 ~ 9245561 (-) |
| CI01000026_09203430_09218432 | FTO | coding | downstream | 80231 | 9203430 ~ 9218432 (-) |
| CI01000026_09147356_09156946 | NA | coding | downstream | 140137 | 9147328 ~ 9158526 (-) |
| CI01000026_08861639_08866198 | IRX5A, IRX5 | coding | downstream | 430514 | 8861639 ~ 8868149 (-) |
| CI01000026_08722735_08726049 | IRX6A, IRX6 | coding | downstream | 572469 | 8722139 ~ 8726194 (-) |
| CI01000026_09470361_09503958 | NA | coding | upstream | 171424 | 9470297 ~ 9504385 (-) |
| CI01000026_09911514_09913512 | NA | coding | upstream | 612008 | 9910881 ~ 9913651 (-) |
| CI01000026_09946977_09948009 | NA | coding | upstream | 648057 | 9946930 ~ 9948167 (-) |
| CI01000026_09991433_10006016 | CYLDA, CYLD | coding | upstream | 692442 | 9991315 ~ 10006016 (-) |
| CI01000026_10014914_10019772 | NOD2 | coding | upstream | 714702 | 10013575 ~ 10020199 (-) |
| G132498 | NA | non-coding | downstream | 96271 | 9198442 ~ 9202392 (-) |
| G132465 | NA | non-coding | downstream | 195060 | 9103193 ~ 9103603 (-) |
| G132523 | NA | non-coding | downstream | 206839 | 9091609 ~ 9091824 (-) |
| G132197 | NA | non-coding | downstream | 348147 | 8950284 ~ 8950516 (-) |
| G132196 | NA | non-coding | downstream | 348558 | 8949901 ~ 8950105 (-) |
| G132556 | NA | non-coding | upstream | 53339 | 9352212 ~ 9353181 (-) |
| G132581 | NA | non-coding | upstream | 71711 | 9370584 ~ 9372605 (-) |
| G132580 | NA | non-coding | upstream | 111940 | 9410813 ~ 9413756 (-) |
| G132606 | NA | non-coding | upstream | 136124 | 9434997 ~ 9435342 (-) |
| G132615 | NA | non-coding | upstream | 169091 | 9467964 ~ 9468258 (-) |
| G131742 | NA | other | downstream | 990956 | 8306776 ~ 8307707 (-) |
| G130256 | NA | other | downstream | 2981509 | 6275511 ~ 6317154 (-) |
| G129750 | NA | other | downstream | 4479381 | 4785885 ~ 4820249 (-) |
| G129658 | NA | other | downstream | 4925594 | 4367296 ~ 4373069 (-) |
| G129476 | NA | other | downstream | 5627779 | 3670574 ~ 3670884 (-) |
| G132575 | NA | other | upstream | 88278 | 9387151 ~ 9387716 (-) |
| G132721 | NA | other | upstream | 251157 | 9550030 ~ 9550644 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | upstream | 1049320 | 10347746 ~ 10351783 (-) |
| CI01000026_10788054_10788652 | CD59 | other | upstream | 1488466 | 10787339 ~ 10789709 (-) |
| G133790 | NA | other | upstream | 1535142 | 10834015 ~ 10859589 (-) |
