CI01000026_09470361_09503958


Basic Information

Item Value
gene id CI01000026_09470361_09503958
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9470297 ~ 9504385 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_09470361_09503958.mRNA
AGCAGCATGCCAGCTGCTAATATACTTTCATAGGGTGCACCTGGAGCATCTGGTGCCCCTTGTGTTAGGCCATATGAGCAGAGAAAGGAAGAAGCTCCCCAGGGTAACTGAACCTTGCTTTTTCTTTCATGCTCTTGTGCTCTTTCCCACATCATGTAATAAATATATACAGTAGTGAAATGCTGAAACATACTTTTTGATATTTTCTAAGGAGCTAAACCATACTGCATACAGGAAAATGAAGTGGTTACATGCAAAATTAAGACTAAGCGAAGGCTAGATCATTTCAAAAGGTTATCAGCCCTTTAACAATTTGACAAATTAATTACTTTAGAAATGCTCTTGTGTATAGCACAAGAGGCTTGACACAAGTTTAAAATGTAAAAGAAAACAACCGAACTCAAACAAGAGGGTTTTCAGATATGCTATGGCTACTCCTTTTAGTATAACAAAATTGAATTTGGTAGATCTTATTTACAGCAGCGTACTCCTAGGGAGAGGAGAGATCAGCTGCTATAAAAGACAAACTGAAATCCGAGTGCAGAGACAAGTGAAGAAGAGTGAACGCTTCAGTTTTCTTCACTATCTCCTGTGGACTGATTGTTCAGAATTGAGGGAGGGGCGCCGCGCCGCTGCACAGACCTACACAGACAAGTCAACAGAACATTCTTATGGCATGACAGGCAAAACAGCACCAATGACCCCTGTGAACTTCATGAAGAATTTCTTTGGTTTACACAGTGAGAGAAAGGTAAACATAAGAAAGCGAAAACAGATCTGCGTGATGAATCAAACAGATCGCAGTATGAGCGTGCAACATTGCTGCAGGCGCAAAAACCCATTTATTTCTGCATTAGAGGCCTCCTACAACAATATGTAAAAGGTGAACTCTTTTTTACGTTTTTTTTTTTTTTCTTCTTTACAGTCTTCTAGGGTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_09470361_09503958.mRNA False 944 mRNA 0.40 8 9470297 9504385

Neighbor

gene id symbol gene type direction distance location
CI01000026_09233035_09245301 FTO coding downstream 224736 9232857 ~ 9245561 (-)
CI01000026_09203430_09218432 FTO coding downstream 251865 9203430 ~ 9218432 (-)
CI01000026_09147356_09156946 NA coding downstream 311771 9147328 ~ 9158526 (-)
CI01000026_08861639_08866198 IRX5A, IRX5 coding downstream 602148 8861639 ~ 8868149 (-)
CI01000026_08722735_08726049 IRX6A, IRX6 coding downstream 744103 8722139 ~ 8726194 (-)
CI01000026_09911514_09913512 NA coding upstream 406496 9910881 ~ 9913651 (-)
CI01000026_09946977_09948009 NA coding upstream 442545 9946930 ~ 9948167 (-)
CI01000026_09991433_10006016 CYLDA, CYLD coding upstream 486930 9991315 ~ 10006016 (-)
CI01000026_10014914_10019772 NOD2 coding upstream 509190 10013575 ~ 10020199 (-)
CI01000026_10035392_10061141 NKD1 coding upstream 530684 10035069 ~ 10062470 (-)
G132615 NA non-coding downstream 2039 9467964 ~ 9468258 (-)
G132606 NA non-coding downstream 34955 9434997 ~ 9435342 (-)
G132580 NA non-coding downstream 56541 9410813 ~ 9413756 (-)
G132581 NA non-coding downstream 97692 9370584 ~ 9372605 (-)
G132556 NA non-coding downstream 117116 9352212 ~ 9353181 (-)
G132632 NA non-coding upstream 5390 9509775 ~ 9510002 (-)
G132639 NA non-coding upstream 14728 9519113 ~ 9519474 (-)
G132709 NA non-coding upstream 20625 9525010 ~ 9525219 (-)
G132717 NA non-coding upstream 41384 9545769 ~ 9546001 (-)
G132722 NA non-coding upstream 47446 9551831 ~ 9552246 (-)
G132575 NA other downstream 82581 9387151 ~ 9387716 (-)
G131742 NA other downstream 1162590 8306776 ~ 8307707 (-)
G130256 NA other downstream 3153143 6275511 ~ 6317154 (-)
G129750 NA other downstream 4651015 4785885 ~ 4820249 (-)
G129658 NA other downstream 5097228 4367296 ~ 4373069 (-)
G132721 NA other upstream 45645 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 843808 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 1282954 10787339 ~ 10789709 (-)
G133790 NA other upstream 1329630 10834015 ~ 10859589 (-)
G133802 NA other upstream 1797530 11301915 ~ 11307181 (-)

Expression


Co-expression Network