Gene
RNA
| Item | Value |
|---|---|
| gene id | G132717 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 9545769 ~ 9546001 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: neuroligin-2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150935 | True | 233 | lncRNA | 0.45 | 1 | 9545769 | 9546001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_09470361_09503958 | NA | coding | downstream | 41384 | 9470297 ~ 9504385 (-) |
| CI01000026_09233035_09245301 | FTO | coding | downstream | 300208 | 9232857 ~ 9245561 (-) |
| CI01000026_09203430_09218432 | FTO | coding | downstream | 327337 | 9203430 ~ 9218432 (-) |
| CI01000026_09147356_09156946 | NA | coding | downstream | 387243 | 9147328 ~ 9158526 (-) |
| CI01000026_08861639_08866198 | IRX5A, IRX5 | coding | downstream | 677620 | 8861639 ~ 8868149 (-) |
| CI01000026_09911514_09913512 | NA | coding | upstream | 364880 | 9910881 ~ 9913651 (-) |
| CI01000026_09946977_09948009 | NA | coding | upstream | 400929 | 9946930 ~ 9948167 (-) |
| CI01000026_09991433_10006016 | CYLDA, CYLD | coding | upstream | 445314 | 9991315 ~ 10006016 (-) |
| CI01000026_10014914_10019772 | NOD2 | coding | upstream | 467574 | 10013575 ~ 10020199 (-) |
| CI01000026_10035392_10061141 | NKD1 | coding | upstream | 489068 | 10035069 ~ 10062470 (-) |
| G132709 | NA | non-coding | downstream | 20550 | 9525010 ~ 9525219 (-) |
| G132639 | NA | non-coding | downstream | 26295 | 9519113 ~ 9519474 (-) |
| G132632 | NA | non-coding | downstream | 35767 | 9509775 ~ 9510002 (-) |
| G132615 | NA | non-coding | downstream | 77511 | 9467964 ~ 9468258 (-) |
| G132722 | NA | non-coding | upstream | 5830 | 9551831 ~ 9552246 (-) |
| G132726 | NA | non-coding | upstream | 22813 | 9568814 ~ 9569136 (-) |
| G132784 | NA | non-coding | upstream | 127728 | 9673729 ~ 9673995 (-) |
| G133045 | NA | non-coding | upstream | 256969 | 9802970 ~ 9803595 (-) |
| G133095 | NA | non-coding | upstream | 306926 | 9852927 ~ 9853113 (-) |
| G132575 | NA | other | downstream | 158053 | 9387151 ~ 9387716 (-) |
| G131742 | NA | other | downstream | 1238062 | 8306776 ~ 8307707 (-) |
| G130256 | NA | other | downstream | 3228615 | 6275511 ~ 6317154 (-) |
| G129750 | NA | other | downstream | 4726487 | 4785885 ~ 4820249 (-) |
| G129658 | NA | other | downstream | 5172700 | 4367296 ~ 4373069 (-) |
| G132721 | NA | other | upstream | 4029 | 9550030 ~ 9550644 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | upstream | 802192 | 10347746 ~ 10351783 (-) |
| CI01000026_10788054_10788652 | CD59 | other | upstream | 1241338 | 10787339 ~ 10789709 (-) |
| G133790 | NA | other | upstream | 1288014 | 10834015 ~ 10859589 (-) |
| G133802 | NA | other | upstream | 1755914 | 11301915 ~ 11307181 (-) |
