Gene
RNA
| Item | Value |
|---|---|
| gene id | G132722 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 9551831 ~ 9552246 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: serine--tRNA ligase, cytoplasmic |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150943 | True | 416 | lncRNA | 0.53 | 1 | 9551831 | 9552246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_09470361_09503958 | NA | coding | downstream | 47446 | 9470297 ~ 9504385 (-) |
| CI01000026_09233035_09245301 | FTO | coding | downstream | 306270 | 9232857 ~ 9245561 (-) |
| CI01000026_09203430_09218432 | FTO | coding | downstream | 333399 | 9203430 ~ 9218432 (-) |
| CI01000026_09147356_09156946 | NA | coding | downstream | 393305 | 9147328 ~ 9158526 (-) |
| CI01000026_08861639_08866198 | IRX5A, IRX5 | coding | downstream | 683682 | 8861639 ~ 8868149 (-) |
| CI01000026_09911514_09913512 | NA | coding | upstream | 358635 | 9910881 ~ 9913651 (-) |
| CI01000026_09946977_09948009 | NA | coding | upstream | 394684 | 9946930 ~ 9948167 (-) |
| CI01000026_09991433_10006016 | CYLDA, CYLD | coding | upstream | 439069 | 9991315 ~ 10006016 (-) |
| CI01000026_10014914_10019772 | NOD2 | coding | upstream | 461329 | 10013575 ~ 10020199 (-) |
| CI01000026_10035392_10061141 | NKD1 | coding | upstream | 482823 | 10035069 ~ 10062470 (-) |
| G132717 | NA | non-coding | downstream | 5830 | 9545769 ~ 9546001 (-) |
| G132709 | NA | non-coding | downstream | 26612 | 9525010 ~ 9525219 (-) |
| G132639 | NA | non-coding | downstream | 32357 | 9519113 ~ 9519474 (-) |
| G132632 | NA | non-coding | downstream | 41829 | 9509775 ~ 9510002 (-) |
| G132726 | NA | non-coding | upstream | 16568 | 9568814 ~ 9569136 (-) |
| G132784 | NA | non-coding | upstream | 121483 | 9673729 ~ 9673995 (-) |
| G133045 | NA | non-coding | upstream | 250724 | 9802970 ~ 9803595 (-) |
| G133095 | NA | non-coding | upstream | 300681 | 9852927 ~ 9853113 (-) |
| G133096 | NA | non-coding | upstream | 301100 | 9853346 ~ 9853578 (-) |
| G132721 | NA | other | downstream | 1187 | 9550030 ~ 9550644 (-) |
| G132575 | NA | other | downstream | 164115 | 9387151 ~ 9387716 (-) |
| G131742 | NA | other | downstream | 1244124 | 8306776 ~ 8307707 (-) |
| G130256 | NA | other | downstream | 3234677 | 6275511 ~ 6317154 (-) |
| G129750 | NA | other | downstream | 4732549 | 4785885 ~ 4820249 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | upstream | 795947 | 10347746 ~ 10351783 (-) |
| CI01000026_10788054_10788652 | CD59 | other | upstream | 1235093 | 10787339 ~ 10789709 (-) |
| G133790 | NA | other | upstream | 1281769 | 10834015 ~ 10859589 (-) |
| G133802 | NA | other | upstream | 1749669 | 11301915 ~ 11307181 (-) |
| G136110 | NA | other | upstream | 5002671 | 14554917 ~ 14555436 (-) |
