G132726


Basic Information

Item Value
gene id G132726
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9568814 ~ 9569136 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150947
GTGAATCTCCCCCACATTTTTGAATGGGTTTTGTTTCACAATCCTCTCCAGTGTGCGGTTATCCCTATTGCTTGTACACTTTTTTCTACCATATCTTTTCCTTCCCTTCGTCTCTCTATTAATGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCTTTCGCGTCTTGCCCTCCTTGTGCAAGGTGTCAATGGTCGTCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGGTTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTGCAGGTGTTTTGAGTTAATTAGCTGA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: cAMP-regulated phosphoprotein 21-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150947 True 323 lncRNA 0.45 1 9568814 9569136

Neighbor

gene id symbol gene type direction distance location
CI01000026_09470361_09503958 NA coding downstream 64429 9470297 ~ 9504385 (-)
CI01000026_09233035_09245301 FTO coding downstream 323253 9232857 ~ 9245561 (-)
CI01000026_09203430_09218432 FTO coding downstream 350382 9203430 ~ 9218432 (-)
CI01000026_09147356_09156946 NA coding downstream 410288 9147328 ~ 9158526 (-)
CI01000026_08861639_08866198 IRX5A, IRX5 coding downstream 700665 8861639 ~ 8868149 (-)
CI01000026_09911514_09913512 NA coding upstream 341745 9910881 ~ 9913651 (-)
CI01000026_09946977_09948009 NA coding upstream 377794 9946930 ~ 9948167 (-)
CI01000026_09991433_10006016 CYLDA, CYLD coding upstream 422179 9991315 ~ 10006016 (-)
CI01000026_10014914_10019772 NOD2 coding upstream 444439 10013575 ~ 10020199 (-)
CI01000026_10035392_10061141 NKD1 coding upstream 465933 10035069 ~ 10062470 (-)
G132722 NA non-coding downstream 16568 9551831 ~ 9552246 (-)
G132717 NA non-coding downstream 22813 9545769 ~ 9546001 (-)
G132709 NA non-coding downstream 43595 9525010 ~ 9525219 (-)
G132639 NA non-coding downstream 49340 9519113 ~ 9519474 (-)
G132632 NA non-coding downstream 58812 9509775 ~ 9510002 (-)
G132784 NA non-coding upstream 104593 9673729 ~ 9673995 (-)
G133045 NA non-coding upstream 233834 9802970 ~ 9803595 (-)
G133095 NA non-coding upstream 283791 9852927 ~ 9853113 (-)
G133096 NA non-coding upstream 284210 9853346 ~ 9853578 (-)
G133104 NA non-coding upstream 308176 9877312 ~ 9877548 (-)
G132721 NA other downstream 18170 9550030 ~ 9550644 (-)
G132575 NA other downstream 181098 9387151 ~ 9387716 (-)
G131742 NA other downstream 1261107 8306776 ~ 8307707 (-)
G130256 NA other downstream 3251660 6275511 ~ 6317154 (-)
G129750 NA other downstream 4749532 4785885 ~ 4820249 (-)
CI01000026_10347872_10351783 CEBPA other upstream 779057 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 1218203 10787339 ~ 10789709 (-)
G133790 NA other upstream 1264879 10834015 ~ 10859589 (-)
G133802 NA other upstream 1732779 11301915 ~ 11307181 (-)
G136110 NA other upstream 4985781 14554917 ~ 14555436 (-)

Expression


Co-expression Network