G133512


Basic Information

Item Value
gene id G133512
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11368840 ~ 11369299 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151794
CACGTAAAGTCCAGTCCTCCAGTGGGATCTCAGAAGTAGTCGTCACTGTCAGATTGTTAAAATGACTTACATCTGCTGGCCAGTATTCCTCACATTTTATCCGTCCCTGCTCATTGCATTTGGTGAGCATGACAATAGTCTGCACGTTTTTCTCCCAGATCAGTCGCCAGAAGTCATTGACAGTGCAGGGCAGTGGCCCTTGGGCTGCGATAAACTCCTTCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151794 True 225 lncRNA 0.48 2 11368840 11369299

Neighbor

gene id symbol gene type direction distance location
CI01000026_11298219_11305000 NA coding upstream 63827 11298219 ~ 11305013 (+)
CI01000026_11266022_11278889 NA coding upstream 89941 11266022 ~ 11278899 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 104306 11261081 ~ 11264534 (+)
CI01000026_11241496_11246081 NA coding upstream 122759 11241496 ~ 11246204 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 128407 11239339 ~ 11240433 (+)
CI01000026_11403059_11415298 PTPN5 coding downstream 33760 11403059 ~ 11415512 (+)
CI01000026_11436071_11446054 KIAA0232 coding downstream 66202 11435501 ~ 11446322 (+)
CI01000026_11456632_11473446 TBC1D14 coding downstream 87333 11456632 ~ 11473653 (+)
CI01000026_11483300_11485455 TADA2B coding downstream 114001 11483300 ~ 11486080 (+)
CI01000026_11497016_11677778 SORCS2 coding downstream 127717 11497016 ~ 11677778 (+)
G133533 NA non-coding upstream 6613 11361816 ~ 11362227 (+)
G133528 NA non-coding upstream 14389 11354162 ~ 11354451 (+)
G133530 NA non-coding upstream 19234 11349312 ~ 11349606 (+)
G133529 NA non-coding upstream 19916 11347963 ~ 11348924 (+)
G133523 NA non-coding upstream 26352 11340639 ~ 11342488 (+)
G133536 NA non-coding downstream 25745 11395044 ~ 11395244 (+)
G133542 NA non-coding downstream 106818 11476117 ~ 11477544 (+)
G133564 NA non-coding downstream 232903 11602202 ~ 11602886 (+)
G133572 NA non-coding downstream 289231 11658530 ~ 11659089 (+)
G133594 NA non-coding downstream 362512 11731811 ~ 11732814 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 289760 11075784 ~ 11079080 (+)
G133192 NA other upstream 1206879 10159819 ~ 10161961 (+)
G132667 NA other upstream 1799680 9568739 ~ 9569160 (+)
G131077 NA other upstream 2862053 8501408 ~ 8506787 (+)

Expression


Co-expression Network