CI01000027_02492454_02508459


Basic Information

Item Value
gene id CI01000027_02492454_02508459
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2492077 ~ 2508602 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02492454_02508459.mRNA
ATATTAAAACGGCGAGGGGAGCCGCTCGGCTGGCAGGCCTCAACGCTGACTGACACCCTCCCAATGATAGCGAAATCTAGCAGGTGCGTTCACGCGCTCTCCTCTGATCTGTACACCGACCCACTTGTCTTCTTAGTGTACTCTGTAATAAGCTGCTTCAAAGATCACTATGTATGCTAGAGACCGATAAGATCTGCAGTATGGAGTTCTCCTGTCGTCTGTCTCGCGCTCGTGCTCTCGTACTCGGTCTCTCTATCACTCACTCTTTTGGTTTTCTTAAGAAAATGTCAGTCTAATCATATCTTAACGCTTTGATAACAGGCTCTTTTTTTGCAATGTGAGAAGAACAGATACTCCAGTGTCTTAAAGGCCGAGGGATGGGAATGGAAATGAAAGAAAACACCCTTGAAATTCAGTTTTTCTCCAGTGTGGGTGTAGCCGCGGTGGCATTTGACCTCATGCACAATTACTTAATTGTTTCATTTAAAGACGAAGAAAGATCATACAAACTCACTCTATTGAATCTGGTCCTCAGGATCCGTTCGAGCTGCGGTGTCTCTTCGAGCGCAGAAACGCGCCAGGTGTCCCAGCAATTAGCTGCTGTGAGATTGATGAGATCTGGCTGGGCTGATGGAATCACTCTTATTACATTACATCTGGACCGATGTCCATTTATTTATGAAGCACCGGAGGAGCAGCCATCTGCGAGGGTTCCTTTCACTCCTGCTAATGAGCGCCGTGTCACCGTGGCCCGGTCTCCTCTGGACCGTCCCGGGAGATGCGTTACAGCTGTCGGGCCCCTCGGCTCGATCCTGCGGCTCGCAGCGAAGAGCCTCAAACGGCATCGACTTCCGCCCATTCCCAGGCTGCATGTTGCTAACGGCGCTCCTGATGCCGCTGTGTTCTTCTCCAGGAGGATTAGACACTTCCTGAATTATATGTTGTCAGCCGTGAGGATTGTGAATCTGAATACTCACATGTTCAGAAAGAACAGTAAGATGATGACTTTATCTACTCTAATGTCATCAACAGTTAAAACAGGAAACTTTATTTCCAAGAACTGCAAAAGCACAAGCATTTCCACACAATACGTAGCCATGTTTAAGAAAAGATTTCAGTCATGCTCAGAATTGAAAAGAGACCAAGGTCTGCTCCCAAAGCTGAGAAAACTCAAGATTTCTCAACAAATCTTTAGTTAAATCTCCTTTTTAGACTTTTATTGTGGGGGAAAAAAGGACAGAAATCTCTTGTCAACTCTAGAGTTTCAGAAGAGATCTCAAAAATGTATCAACCTGTACTCAAAATATGCCAAAGTTTTCAGTCAAATAACAGTGATCTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02492454_02508459.mRNA True 1342 mRNA 0.45 7 2492077 2508602

Neighbor

gene id symbol gene type direction distance location
CI01000027_02455787_02458435 DCSTAMP coding upstream 33033 2455153 ~ 2459044 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding upstream 39542 2427563 ~ 2452535 (+)
CI01000027_02419674_02422700 NA coding upstream 68949 2419633 ~ 2423128 (+)
CI01000027_02337884_02402668 RIMS2 coding upstream 89409 2337884 ~ 2402668 (+)
CI01000027_02254195_02308930 NA coding upstream 181991 2253903 ~ 2310086 (+)
CI01000027_02530086_02589227 NA coding downstream 21036 2529638 ~ 2589476 (+)
CI01000027_02611537_02740618 ZFPM2, ZFPM2A coding downstream 102935 2611537 ~ 2740618 (+)
CI01000027_02895512_02924151 NA coding downstream 386910 2895512 ~ 2924197 (+)
CI01000027_02941870_02946290 OXR1 coding downstream 433268 2941870 ~ 2948777 (+)
CI01000027_02981155_02982628 NA coding downstream 472409 2981011 ~ 2982885 (+)
G138653 NA non-coding upstream 99427 2386701 ~ 2392650 (+)
G138651 NA non-coding upstream 146312 2341204 ~ 2345765 (+)
G138683 NA non-coding upstream 156427 2331989 ~ 2335650 (+)
G138675 NA non-coding upstream 162967 2326892 ~ 2329110 (+)
G138740 NA non-coding downstream 13904 2522506 ~ 2524556 (+)
G138671 NA non-coding downstream 85465 2594067 ~ 2603016 (+)
G138756 NA non-coding downstream 96034 2604636 ~ 2604853 (+)
G138757 NA non-coding downstream 97665 2606267 ~ 2606490 (+)
G138515 NA other upstream 815217 1664408 ~ 1676860 (+)
G138436 NA other upstream 984261 1506961 ~ 1507816 (+)
G138290 NA other upstream 1492896 995970 ~ 999181 (+)
G138247 NA other upstream 1622502 855388 ~ 893121 (+)
G138238 NA other upstream 1660394 829774 ~ 831683 (+)
G138915 NA other downstream 975785 3484387 ~ 3486647 (+)
G138953 NA other downstream 993470 3502072 ~ 3520065 (+)
G140436 NA other downstream 2228796 4737398 ~ 4774262 (+)
G140440 NA other downstream 2271815 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2540321 5050310 ~ 5055755 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G114556 NA non-coding NC_056714.1 CM032083.1 19679383 ~ 19679686 (+)