CI01000027_02742168_02773304


Basic Information

Item Value
gene id CI01000027_02742168_02773304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2742168 ~ 2773304 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02742168_02773304.mRNA
ATGTTGCGCAGAAAGACAAACGGACGAGAAGATGGGGACAGTGTCAAACCTGATAAAAAGAAGACATCCGAGGACTCTGCTGTTCCTCATGTGACTGTCTCTCAGAGGAGTTGCTGGGCTGTTGTATCCTTCTGGATGAAGGTTCTGCTCTTCATCATCTTCACTCCAGCTTTCCTGAACTACGCCTCACTGCAGAGAGAGGGACAGGTGCTGTCACCCACAGGTGCTCAGCTGATTGATATCGGCCTTGGCCAACAGATCCATATGTTGTGCAAAGGATATGGAAGACCAGTTATTGTTCTTGATGCTCCAGCAGGAATGTCTTCAGATATTTGGTACCATGTCCAAGAGAGTCTTTCATTATCAACAAAGGTGTGCACCTATGACAGAGTCGGTCTGGGTTTTAGCCGAAGAACCCTGCAGAATGAAACTACAGGCACAGAGAAAGTGTGGGGATTATCAACCACTGGAAGGATGGTGGATGACCTTCATCGATTGGTCAAGGCTGCAGATATAGCCACACCCTTCATTCTGATTGGCTCTGAGCTGGGCACACTCAATGGCAGGTTCTACAGCCACATCCATGACACGGAAGTGTCTGACCTGGTGCTGATCGATCCGATCCCAGAGGATGTCTTTGAAGAGGAGAAGTGGCAGCAGTTTTGGTACTCTCACCTCGTCCCATCCCTGCAGATGATGCAGTTCTCTGCAGCCGCAGGTTTGAGTCGTCTGCTCATAATTCTGGGCGTGTTGAAGCCGGTCATTCAGGGAGATGATGTCTCAGGAGAAATCCTGCAGAGACAGAAATATCTCCTGTGTAACCCTGCTCACCAGAGCGCTGCAGTAGACGAGCATTTCTTTCTCAATGAGAGTGCATCTCAAGTCAGGGAGATCTCCAGATATAAGCCTCTCTCTAGCAAGACATCTGTGCATGTGATCACTGGGGAATCGTTTGATGATCAGCTTCCTTCAGATCTCAACCAAGTGGTTGCTGAACTTCAGAGCAAGTTTTTGGAGCGCTCTTATCCCAGTGCCAATCACATTCAAATTCGTGGGGCGGATCGTCACATGATCTACAAAAATCCATCCTCGGTTATCAAACATTTGCATAAGCTTGTGTCACAAAGACAGTCCAACCAACAGAGGCAG

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02742168_02773304.mRNA True 1149 mRNA 0.48 11 2742168 2773304

Neighbor

gene id symbol gene type direction distance location
CI01000027_02460101_02470648 DPYS coding downstream 271363 2459265 ~ 2470805 (-)
CI01000027_02314898_02317288 NA coding downstream 424860 2314551 ~ 2317308 (-)
CI01000027_02240021_02241453 NA coding downstream 500715 2239996 ~ 2241453 (-)
CI01000027_02226447_02227499 NA coding downstream 514669 2225781 ~ 2227499 (-)
CI01000027_02147653_02152768 NA coding downstream 588682 2147557 ~ 2153486 (-)
CI01000027_02840202_02843749 NA coding upstream 66178 2839482 ~ 2845691 (-)
CI01000027_02950348_02954214 SQLE, SQLEA coding upstream 176802 2950106 ~ 2954214 (-)
CI01000027_02961909_02972343 RNF144B coding upstream 188460 2961764 ~ 2972343 (-)
CI01000027_02984235_02987159 CCDC127, CCDC127A coding upstream 210703 2984007 ~ 2987159 (-)
CI01000027_02989304_02990854 NA coding upstream 215985 2989289 ~ 2990854 (-)
G139743 NA non-coding downstream 4097 2737348 ~ 2738071 (-)
G139839 NA non-coding downstream 7851 2733645 ~ 2734317 (-)
G139807 NA non-coding downstream 46731 2695226 ~ 2695437 (-)
G139806 NA non-coding downstream 46982 2694912 ~ 2695186 (-)
G139805 NA non-coding downstream 47744 2694215 ~ 2694424 (-)
G139845 NA non-coding upstream 15045 2788349 ~ 2855600 (-)
G139929 NA non-coding upstream 156004 2929308 ~ 2929766 (-)
G139883 NA non-coding upstream 174027 2947331 ~ 2947916 (-)
G139939 NA non-coding upstream 338964 3112268 ~ 3114186 (-)
CI01000027_03117518_03132307 RUNDC3B non-coding upstream 343070 3115633 ~ 3132307 (-)
CI01000027_02119227_02124423 NA other downstream 616140 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 1422007 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 1495191 1240478 ~ 1246267 (-)
G139117 NA other downstream 2504589 234212 ~ 237579 (-)
G140118 NA other upstream 728230 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 1014074 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1149092 3922242 ~ 3931033 (-)
G141481 NA other upstream 1598943 4372247 ~ 4412810 (-)
G141488 NA other upstream 1734171 4507475 ~ 4508971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010209 NA non-coding NC_007127.7 CM002900.2 43765979 ~ 43818565 (+)