Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000027_03689861_03690969 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 3689439 ~ 3691211 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000027_03689861_03690969.mRNA | False | 1204 | mRNA | 0.47 | 4 | 3689439 | 3691211 |
| TU159312 | True | 673 | lncRNA | 0.58 | 1 | 3690173 | 3690845 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_03513546_03521352 | NA | coding | downstream | 168087 | 3512392 ~ 3521352 (-) |
| CI01000027_03501726_03510058 | NA | coding | downstream | 179381 | 3501120 ~ 3510058 (-) |
| CI01000027_03492624_03493292 | NA | coding | downstream | 196147 | 3492500 ~ 3493292 (-) |
| CI01000027_03484797_03490716 | HERPUD2 | coding | downstream | 198486 | 3484742 ~ 3490953 (-) |
| CI01000027_03468269_03469904 | NA | coding | downstream | 219224 | 3467864 ~ 3470215 (-) |
| CI01000027_03694455_03710634 | NA | coding | upstream | 3016 | 3694227 ~ 3711039 (-) |
| CI01000027_03750919_03761043 | FLI1, FLI1B | coding | upstream | 59619 | 3750830 ~ 3761063 (-) |
| CI01000027_03787377_03788902 | NA | coding | upstream | 96166 | 3787377 ~ 3790279 (-) |
| CI01000027_03832200_03836030 | NA | coding | upstream | 139994 | 3831205 ~ 3836530 (-) |
| CI01000027_03898513_03905519 | NA | coding | upstream | 206055 | 3897266 ~ 3906494 (-) |
| G140199 | NA | non-coding | downstream | 17196 | 3671941 ~ 3672243 (-) |
| G140197 | NA | non-coding | downstream | 17930 | 3670219 ~ 3671509 (-) |
| G140183 | NA | non-coding | downstream | 46214 | 3642946 ~ 3643225 (-) |
| G140176 | NA | non-coding | downstream | 66792 | 3622422 ~ 3622647 (-) |
| G140134 | NA | non-coding | downstream | 97999 | 3586433 ~ 3591440 (-) |
| G140200 | NA | non-coding | upstream | 259 | 3691470 ~ 3691687 (-) |
| G140201 | NA | non-coding | upstream | 881 | 3692092 ~ 3692459 (-) |
| G140202 | NA | non-coding | upstream | 1663 | 3692874 ~ 3693219 (-) |
| G140203 | NA | non-coding | upstream | 5453 | 3696664 ~ 3697044 (-) |
| G140204 | NA | non-coding | upstream | 6006 | 3697217 ~ 3697469 (-) |
| G140118 | NA | other | downstream | 104760 | 3509352 ~ 3584679 (-) |
| CI01000027_02226447_02227499 | NA | other | downstream | 1461414 | 2225781 ~ 2227499 (-) |
| CI01000027_02119227_02124423 | NA | other | downstream | 1563411 | 2119131 ~ 2125142 (-) |
| CI01000027_01303308_01319462 | NR2F5, NR2F1, NR2F1.L, NR2F2 | other | downstream | 2369278 | 1302034 ~ 1321178 (-) |
| CI01000027_01241417_01245177 | NA | other | downstream | 2442462 | 1240478 ~ 1246267 (-) |
| CI01000027_03922380_03931033 | NA | other | upstream | 231185 | 3922242 ~ 3931033 (-) |
| G141481 | NA | other | upstream | 681036 | 4372247 ~ 4412810 (-) |
| G141488 | NA | other | upstream | 816264 | 4507475 ~ 4508971 (-) |
| G141728 | NA | other | upstream | 1185856 | 4877067 ~ 4877766 (-) |
