CI01000027_07695223_07701346


Basic Information

Item Value
gene id CI01000027_07695223_07701346
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7695046 ~ 7701823 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07695223_07701346.mRNA
CTATGAAAGGAGGGTCTTACCCTCCCCTGTCCATTCAGCCGCTGGGTACTGGGACTGTGGTCCAGACCTCACCCTCAAGCCTGTCATTATATTCACTTAGCAGCCACAAAGACCTGCAGCCCTTCACAGCCTCTGTGCACAGTTCTATTGTGACTTAACACTTCACACCACTCTGAGATGGAGCTTTTGGGTCTCCGACAGCCCTTCACCCAGTTTCAGGAGGAAAAGTACCAGATGCTGGAGCTGAACCAACGTCTCGAATCATACTTGGGCCGTGTGAAGCTTCTGGAGGAGGAAAACAAGCTACTGCGAGAGGAGATCCACACTCTCAAGAGCAGCAGGGACCCACCAGGCCAGCGCAAAGCTCAAGAGGAAGCTCTCAGCCAGGCCAGGAGGATGATGGAGGAGGCTTGGAGGAAGAAAGACCATGTGGAGCTGGAAGTGGAGAACTTAATGGAGGATATGGAGATGGTGAGTATTCAAAGACAGAAGGCGAAGACCGCAAAGGCTGAAGCACAGAGAAAACTTGTGGAGAGCAAGAAGGAGCTGGAAGAGGAGCGTAGGGCTCAGATTTGGCTTAGAGAGAAGGTTGGACAGCTTGAGAAAGATGTCTTGCTACAGATGCAAGTCCACAAGGAGAACATGGAAACTTTGCAGGTCTCTCTGAAACAGACAAAGCAAGTACTAATGGCCCCACAGCACACTCAAACTATCAGCATCCCTGACCTGGGACAGGAGTACAGCCAAAGAGCAGCTCAAGCCTGGCAGGAGGCAACCAACAACTATCAGAGACAGGTTGGATGTCTGGAGGAAAGTCTGAACCAGGCCAAAGCTAACATGGCAAAGATTCACCAGGAGAAGAGAGAGAACCAGCATCAGGTTCAGCATCTGGCCAAGGAGCTCGAGAGTATGAAGACTAAGAGGCAGATGCTGGAGAAACATGTAGTGCAGCAGAGAGAAGAACAGAATCAGGAGCTTCAACATCTTCAGGCCCAAGTAGATGCTCTGGAGTTGGAGAAAGACAGCCTGGGGCAGCAGATAGACAGCCTGATGGTGGACAGACAAAATCTGCTGCAGATGAAGATGTCTCTTGGACTGGAGGTGGCCACATACAGAGCTTTGCTGGACAGCGAGGGCCTGAGAATCGACAGACCAACAACAAACAAAACAACAAACTCTGCTTTCTTTTTAGATGCACTCTCAAAGCCCATTGGGACCCACCAAACCTTACAGACCACTGCTGCTTCCTGTCATTTCAGCAATACTGTGTCTACAAGTCACAGATCAATCACATCTCGCACTCTGCTGACCAGTGCGACTCCATCATGGACCCCGACTCAAGGGACTCCACAGAAAACACCAACCAAAACCTCAGTGACAGAAAAGACAGGGGTTCATATCTCAGAGGAGTCTAAGAAAGCTGCTCAGGAGTCTGTGGATCATTTACAGGGAGAAAAAGTCCATGAAGACATGGCTCTTGCATCAACTCTCCCCAAAACAGCTGCAGAACCAGAACCACAGCTCAAACCAGAAGATATCAAGGTGGAGGACGAACCAAAACAGTTCCAGGAAGCTCAGATGGTTGAATCTAAAACTGATGAATCTGCATTGATAAGTGTGTCAGCTGACCAACCAAAGAGCTTGTCCCAAACTCCAGAGACCGAAAGCTGGGCTGGTCCATTCACAGATCCTGCAAGAGTTTCAGAAGAAGGTAAGGATGAGGACACTGAAGTGTCTGTCGAAATTGCCCGGATCTCACACGCACCTAAGGTTGCATGGGAAGAAAATAAAACCGTGACAGAGGATGAAAAAGATGATACCTCTGAGATAGATGTAAGATCAGAGAACATCAGTGAAAGCCATACAGTTGAATATGGAGATATGGAGAATGATACATTAACATCCAGTCCAAACACCAATATATTGGCTTCATCGTTCCTTGAGCAAGGAGCTTTAGGTGATTTTGGCTGTCAGGAAGAAACAATTGAAGATCTGATGAGGGTAGATGAACAGGACATTGTGAGCAATATTAGTGAGGAGGTGACAGAGCAATTGAACAGTGAAACTGATGCAGCGATTGATTCAATCAATAAGTGGGACAGACAGGAACCAGAGAGTGAGACAAATGTGATGAGCCCTGAGTCTGAGGTGGAGGAAGAGGGTGAAATGAGTATTGACACTGACATAAAGGATAAAGCAGAAGATGAAAATGTGACTGAAATAGAAGAAGAAGAGATAGAAGTGATTGAGAGAGACATTTCTGTGCAGGATGGAGGTGTAGATTCTCCCAAGAACATTGATCTTCAGGAGAGTATAGAGAAGACTGTACCACCAGCTGAAGCTCATTCAGATCAGGCAGTAAATGAAGACCGTCCTTTACCTGAGGAATCTGAGGGAGAAGAAGAGAACCGAGGTGATGAAGACGACTCCCCAAACATATCAGCCTCATGGAGAACTGATCCTGGTGAGTGTGACAGCTACAGCCAGGAGAACACACTAGCAGACACTCGGCCCTTGATCCGTTATAAAAGTGATGAGGAAACCGACGGGAATGTGCAAGCCTCACACCTCATTGGTGAGACCAGCAACAGTGAGGACGAAAGAGAAAGAGTGGATGGAGGCCATTGGAATGAGAGTGCTACCAAACGCTTCAACACTATGGAGGATCTCACAGAAGAACCAGACATGGATGTCATTGGAGAGATGATGACGGAAGATGTTGTTTCTAAAGAAGAAACACGAGATGATGATGAGAGGGCACACATGACGCTTCAGAGTGTCTCTGGAGTCAATGAAAGTTTGGATGTGGAGAAAGAAATGCCAAGAATTGAGCTCAGGGGAAACCTGGAAGAAGATAGTGGTGATGATGATATGAGAGAAATGGGGAGAGATGAAGATCATGATGTCAAGGTTTATGAGCAAAATGAGAATCCACAACTGATTGAAAACCAGCATATACACACTGAACAGCTTGAGTATGAAACAGTCCATTCATATGAAAGTCAAGAACATGTCGACATGGACCATCCATCCTCATTTTCCGAAACATCTCAGCAAGAACAGCTTGAAATCTCCTTTGAAACTTCAGCAACTCTGACCATGTCCCAAGATGCAGCTACAACCAAAGAACCAGAAAATCTTCTAGATGTTTCCATGCACACCAACATGGATCTGATGGACAGTTATTCTTTGGAAAGCGAGCCAAATATCATGACATCAGACATGCCAAAATCTGACCAGGAAGATTGCAATAGCTCAGAAGATGAGTCCCCAAATGCCAGCCAGTGCTTTCAGAATACAAGCCTTTTCGCAGAGGCTACTCTCACTGAGCAGCCATTAACCTTTACTAATGGAGTCTCCAAGACTAATTCTGTCTCTGACAGCAACGATGTGCCTGAAGAAGTGCTCAGTAAGGAGAAGAGCACTGAAGAAGCTAAAGCCTCTCAGATTGATGACTGGGAGAATTCTAACATCTGGGGCAAAAGCATGAGCATTCCAGATGCAGCCGAGTTCACACACGGAAGTATGGATGAAAATTTAGGCGTTTTCCCAGTGAATGAGACTGAGAATTTGGGAAGTCCAAACAAAATGCCAAATATAGCAGAAAATATCTTTGAAGAACACCTTGAAAGGACAGTGGAGAGCTTTTCTGAAAAAGAAAAGAAAAGTGAGATTCATAGCTTTTTCAGCACTAGTTTAAAGGAGGATTTCTGGAACAAAGGGAAAGTGGAGATGGCAGCTACCTATGACCCTGCCAAGACTGAAGACTTCAACCAGGCTATGGTCTTTGGAGAGGAGTGGAAAGATATGGAGGGAAAGCCAGCAGCAAATGGAAATCCTAAAGAAGAGATGGACATCCTCAAAGTCCAGGATGAGAAACATAAAGATGAACAGCCAACGCAAGGCAAGATGGTCCAATCTGATGACTCTGTTGATGAAGGAGATTCCTGGTCCTCTGGTGATGAGTAACAGCTTTGTCCAATGATGTTTTAGACCATGTAAGACTAAACCAAAAACATAAAAAAGTAGTAGTGTCATATAAATAGATGAACAGAAACATTAAACACAAAGTGCACAAAAAACACTTTCATACATTCACAGAAATTAAACTAGACAAGATTGCAGAGCGTAGTGTGTGTAATGGTACGATGTGATTTCTGTAATGTGAGTCAACAGCCTGGCATAATGTGCCAGCTGTCATCTCAGGATAAGAAGGCGTTGTACTCCATGACAGACGCGGGCAGAAAGGATTCTTAGAGACTTACGATGAAGCCTTAGTTCATTTTTGTTGTTTCTACTAATCAGACCAGCTATCCAATGACCTTCATATGTCAGTTTTAACAAATGACTAATATCCTTTTATGAATTTGCACTGCTATTACAATGGGAAAACAATATGGATTAAAACTTGTTCAAAAAAAAGAAAAAAAAAAGAGAAAAAGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07695223_07701346.mRNA True 4446 mRNA 0.45 5 7695046 7701823

Neighbor

gene id symbol gene type direction distance location
CI01000027_07686575_07690215 GPATCH4 coding upstream 4699 7686575 ~ 7690347 (+)
CI01000027_07666350_07684399 GON4L coding upstream 10586 7666350 ~ 7684460 (+)
CI01000027_07634015_07663101 NPR1B, NPR1 coding upstream 31636 7633964 ~ 7663410 (+)
CI01000027_07618538_07623119 NA coding upstream 70791 7617285 ~ 7624255 (+)
CI01000027_07605090_07608785 NA coding upstream 85506 7604860 ~ 7609540 (+)
CI01000027_07789066_07797594 NA coding downstream 86813 7784774 ~ 7800723 (+)
CI01000027_07843550_07849059 HAPLN2 coding downstream 141023 7842846 ~ 7849134 (+)
CI01000027_07932282_07935282 NA coding downstream 230104 7931927 ~ 7935342 (+)
CI01000027_07947743_07951397 NA coding downstream 245920 7947657 ~ 7951942 (+)
CI01000027_07954714_07957187 NA coding downstream 252891 7954714 ~ 7957449 (+)
G141380 NA non-coding upstream 158713 7536117 ~ 7536333 (+)
G141378 NA non-coding upstream 165044 7529799 ~ 7530002 (+)
G141330 NA non-coding upstream 180167 7502066 ~ 7514879 (+)
G141364 NA non-coding upstream 193559 7501157 ~ 7501487 (+)
G141355 NA non-coding upstream 360909 7333909 ~ 7334137 (+)
G142360 NA non-coding downstream 15297 7717120 ~ 7722230 (+)
G142446 NA non-coding downstream 102719 7804542 ~ 7804806 (+)
G142452 NA non-coding downstream 111837 7813660 ~ 7828067 (+)
G142465 NA non-coding downstream 129169 7830992 ~ 7907635 (+)
CI01000027_07469157_07471720 NA other upstream 223332 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 737279 6951132 ~ 6957767 (+)
G141082 NA other upstream 794123 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 984414 6705983 ~ 6708513 (+)
G141052 NA other upstream 1423446 6271367 ~ 6271600 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 324574 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 556514 8255073 ~ 8264897 (+)
G143033 NA other downstream 2026992 9728815 ~ 9729551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010004 nes coding NC_007127.7 CM002900.2 29043813 ~ 29057849 (+)