CI01000027_07954714_07957187


Basic Information

Item Value
gene id CI01000027_07954714_07957187
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7954714 ~ 7957449 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_07954714_07957187.mRNA
TTGTAGCGCAGCACTGGCCCATTTCAACTCAAATCTAGACCAGCACTGGGAGTTGTGGAAGAAGACGCATGACAAGTTTTACTCCACTAAGACAACAGAGGAGATCCTCCAGACGTTAGCCACGACTCGTGTCCCTCCTGGCTTTAAGAGGCAAACAGCGAAATTCGTGGGCTCTTCTGGGGCTCCTGTCCCAGACTCTCTAGACTGGAGAGAGAAGGGATATGTCACCAATGTGAAAATGCAGGGTGCGTGTGGTTCTTGTTGGGCGTTCAGCTCTGTTGGGGCTCTTGAAGGTCAGCTGATGAAGACCACAGGAAAGCTGGTCGACCTCAGTCCTCAGAACCTGGTGGACTGTTCCTCCGGTTATGGCAACAAGGGCTGCAATGGCGGTTTTATGAGTTCTGCCTTCCAGTATGTCATTGATAATGGCGGAATAGATCCAGAGTCATCTTACCCTTATGAAGGAGTGCAAAAGCAGTGCAGATACAATCCATCCCAGCATGCAGCAAACTGCACCAAGTACTATTTCGTCCGTCAGGGAGATGAAGAGGCCCTGAAGGAGGCTTTGGCCAGTGTCGGCCCTATTTCAGTGGCCATTGATGCCACCCGCCCTCAGTTTATCCTGTACCGCAATGGAGTTTACAATGATCCAACCTGCACCAAAAGAATAAACCATGCAGTGCTGGCTGTGGGATACGGTTCGATTGCTGGGCAGGACTATTGGCTGGTCAAAAACAGTTGGGGTACTGGATTTGGAGATGGTGGCTACATCCGTATAGCCAGAAACCAGAATAACATGTGTGGCATCGCCTCATACGCCTGCTATCCGGTTATGTAACTGAAACCCTGTTGAAATGTGAACGTATCAAAATAAGAAATTTATTGTTTTATAGTCTAATTTCCTGGATGTAAATGTGTTCTATATGTGTATTTTACATTTCCATTGTTTTTAAAAAAAAATCCAAATGTATCTTTTATGAAATAAATATTAAATTTTTAATGTGTTTTCTGGTTTGTGAAGCTTTAAAAGGAAATGCTTTCACTCAATTCAGTTGGTTTCAAATGGTCATTGGAACATCACAAAAGTTTCACATGAGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_07954714_07957187.mRNA True 1100 mRNA 0.45 6 7954714 7957449

Neighbor

gene id symbol gene type direction distance location
CI01000027_07947743_07951397 NA coding upstream 2951 7947657 ~ 7951942 (+)
CI01000027_07932282_07935282 NA coding upstream 19372 7931927 ~ 7935342 (+)
CI01000027_07843550_07849059 HAPLN2 coding upstream 105580 7842846 ~ 7849134 (+)
CI01000027_07789066_07797594 NA coding upstream 157114 7784774 ~ 7800723 (+)
CI01000027_07695223_07701346 NA coding upstream 252891 7695046 ~ 7701823 (+)
CI01000027_07962587_07964571 NA coding downstream 5138 7962587 ~ 7964605 (+)
CI01000027_07973865_07979402 NA coding downstream 16246 7973695 ~ 7979463 (+)
CI01000027_07981813_07992141 NA coding downstream 24188 7981637 ~ 7992272 (+)
CI01000027_08026500_08029412 ENSAB, ENSA coding downstream 68339 8025788 ~ 8032041 (+)
CI01000027_08033124_08037571 NA coding downstream 75522 8032971 ~ 8039234 (+)
G142466 NA non-coding upstream 34733 7908571 ~ 7919981 (+)
G142526 NA non-coding upstream 39071 7915324 ~ 7915643 (+)
G142465 NA non-coding upstream 47079 7830992 ~ 7907635 (+)
G142475 NA non-coding upstream 94098 7859247 ~ 7860616 (+)
G142467 NA non-coding upstream 101508 7846622 ~ 7853206 (+)
G142546 NA non-coding downstream 31670 7989119 ~ 7989331 (+)
G142549 NA non-coding downstream 44075 8001524 ~ 8001756 (+)
G142550 NA non-coding downstream 44607 8002056 ~ 8002354 (+)
CI01000027_07469157_07471720 NA other upstream 483000 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 996947 6951132 ~ 6957767 (+)
G141082 NA other upstream 1053791 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 1244082 6705983 ~ 6708513 (+)
CI01000027_08255251_08264629 NA other downstream 300888 8255073 ~ 8264897 (+)
G143033 NA other downstream 1771366 9728815 ~ 9729551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location