G142550


Basic Information

Item Value
gene id G142550
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8002056 ~ 8002354 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161990
GCTGGAGGTAAAATGGTCAGCTCTTACCGCAAAAAAAGGTCTGTTTGAGGGTCGAGGTGAAAGTTCACTTACTGCGGCTGGAGAGCTCGATAGAAGATAGAACCCTCGAATAAAAACAATCTGATCCAGAGTGCATTGATAACCCTTTACACCCTTCATAATTTGTAATGTAAATTGTAAAAAAAGATTTTCCCTTAAACCTTTTAATAATGTTGTGCATTTTTGGGCCATCTAGAAAATACAGCATAGCGTGAGGGTTAAAGGAAATTAAATTCTGTCAGTAAACTCGCGCATATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161990 True 299 lncRNA 0.38 1 8002056 8002354

Neighbor

gene id symbol gene type direction distance location
CI01000027_07981813_07992141 NA coding upstream 9784 7981637 ~ 7992272 (+)
CI01000027_07973865_07979402 NA coding upstream 22593 7973695 ~ 7979463 (+)
CI01000027_07962587_07964571 NA coding upstream 37451 7962587 ~ 7964605 (+)
CI01000027_07954714_07957187 NA coding upstream 44607 7954714 ~ 7957449 (+)
CI01000027_07947743_07951397 NA coding upstream 50293 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA coding downstream 23434 8025788 ~ 8032041 (+)
CI01000027_08033124_08037571 NA coding downstream 30617 8032971 ~ 8039234 (+)
CI01000027_08052743_08058881 VPS72 coding downstream 50324 8052678 ~ 8059107 (+)
CI01000027_08064283_08072145 TMOD4 coding downstream 59330 8061684 ~ 8072249 (+)
CI01000027_08078236_08079316 LYSMD1 coding downstream 75882 8078236 ~ 8079950 (+)
G142549 NA non-coding upstream 300 8001524 ~ 8001756 (+)
G142546 NA non-coding upstream 12725 7989119 ~ 7989331 (+)
G142491 NA non-coding upstream 19204 7948341 ~ 7948477 (+)
G142516 NA non-coding downstream 836 8003190 ~ 8006260 (+)
G142556 NA non-coding downstream 14416 8016770 ~ 8016998 (+)
G142557 NA non-coding downstream 15086 8017440 ~ 8017669 (+)
G142559 NA non-coding downstream 19587 8021941 ~ 8022259 (+)
G142518 NA non-coding downstream 43890 8046244 ~ 8050580 (+)
CI01000027_07469157_07471720 NA other upstream 530342 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 1044289 6951132 ~ 6957767 (+)
G141082 NA other upstream 1101133 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 1291424 6705983 ~ 6708513 (+)
CI01000027_08255251_08264629 NA other downstream 255983 8255073 ~ 8264897 (+)
G143033 NA other downstream 1726461 9728815 ~ 9729551 (+)

Expression


Co-expression Network