Gene
RNA
| Item | Value |
|---|---|
| gene id | G142465 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 7830992 ~ 7907635 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161879 | False | 746 | lncRNA | 0.35 | 2 | 7830992 | 7831903 |
| TU161878 | True | 5545 | lncRNA | 0.35 | 4 | 7901602 | 7907635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_07789066_07797594 | NA | coding | upstream | 33392 | 7784774 ~ 7800723 (+) |
| CI01000027_07695223_07701346 | NA | coding | upstream | 129169 | 7695046 ~ 7701823 (+) |
| CI01000027_07686575_07690215 | GPATCH4 | coding | upstream | 140645 | 7686575 ~ 7690347 (+) |
| CI01000027_07666350_07684399 | GON4L | coding | upstream | 146532 | 7666350 ~ 7684460 (+) |
| CI01000027_07634015_07663101 | NPR1B, NPR1 | coding | upstream | 167582 | 7633964 ~ 7663410 (+) |
| CI01000027_07932282_07935282 | NA | coding | downstream | 24292 | 7931927 ~ 7935342 (+) |
| CI01000027_07947743_07951397 | NA | coding | downstream | 40108 | 7947657 ~ 7951942 (+) |
| CI01000027_07954714_07957187 | NA | coding | downstream | 47079 | 7954714 ~ 7957449 (+) |
| CI01000027_07962587_07964571 | NA | coding | downstream | 54952 | 7962587 ~ 7964605 (+) |
| CI01000027_07973865_07979402 | NA | coding | downstream | 66060 | 7973695 ~ 7979463 (+) |
| G142452 | NA | non-coding | upstream | 2925 | 7813660 ~ 7828067 (+) |
| G142446 | NA | non-coding | upstream | 26186 | 7804542 ~ 7804806 (+) |
| G142360 | NA | non-coding | upstream | 108762 | 7717120 ~ 7722230 (+) |
| G141380 | NA | non-coding | upstream | 294659 | 7536117 ~ 7536333 (+) |
| G142466 | NA | non-coding | downstream | 936 | 7908571 ~ 7919981 (+) |
| G142526 | NA | non-coding | downstream | 7689 | 7915324 ~ 7915643 (+) |
| G142491 | NA | non-coding | downstream | 40022 | 7948341 ~ 7948477 (+) |
| G142546 | NA | non-coding | downstream | 81484 | 7989119 ~ 7989331 (+) |
| CI01000027_07469157_07471720 | NA | other | upstream | 359278 | 7468964 ~ 7471999 (+) |
| CI01000027_06951132_06956691 | GLIPR2, GLIPR2L | other | upstream | 873225 | 6951132 ~ 6957767 (+) |
| G141082 | NA | other | upstream | 930069 | 6898411 ~ 6900923 (+) |
| CI01000027_06706050_06708485 | NA | other | upstream | 1120360 | 6705983 ~ 6708513 (+) |
| G141052 | NA | other | upstream | 1559392 | 6271367 ~ 6271600 (+) |
| CI01000027_08026500_08029412 | ENSAB, ENSA | other | downstream | 118762 | 8025788 ~ 8032041 (+) |
| CI01000027_08255251_08264629 | NA | other | downstream | 350702 | 8255073 ~ 8264897 (+) |
| G143033 | NA | other | downstream | 1821180 | 9728815 ~ 9729551 (+) |
