CI01000029_00057245_00073837


Basic Information

Item Value
gene id CI01000029_00057245_00073837
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 57245 ~ 73837 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_00057245_00073837.mRNA
AAAAAGGATCTAAAAATAGTTCAACCTGCAGCCACAGAGTGGCGACCTATCACCATGGAAACCGTGACAGTCCACCACTCTATAAAGCCTAAAAAGAGAACATCTTACACAGGGAACATAGCACCACTTTCTGAGTTTGAGTTTGAGACTGAAATCGATCTGAGTTTCTTGGACTTGTTTCTGGTGGACTACTTACGGAATCTCATCAGAAATCTCATCCTGCCTTTTACTCCGATCAACAGCATAAATATCAAAGATATCGACATGACTACTGTGTGTGGGTTAAATGAAACGGTATATGAGTGCAAGTGTGAGGAGCATCATTCCTGGCCCAATGACACTTGCAGGGCCTATCAGGTGTGTGATGGCAGTGTGGGAGACACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTTCGCTTTGCCAGAGAGTTGTTAGCATGTCATTGACAATAAATCAGCCTTTTGACACCAGTCTTACTGACAGTAATAGTGCGAATTACAAAGATTTATCTGGAAAAATCATTAAAGCACTTGACGCAAGTTATTCTAAGCAGCTAATTGGCTACACTCCTGGTTCTACAGAAGTCCGTGACTTCAGGCCTGGTAGTGTTATAGCAGACTATACAATAAGAGCAACATCCAGCAACCTTGATTTTACAGCAGCAAACACAGCAGTCTCCGACTCCCTAAAAGCACAAGGAATCATTTTAGCTGAAGATGCTTTTGCTCGAAGTGAACAAAAGGACTTCACAACAGGTAATTTTTATCCTCTGCAAAAGCTGGATCTGAACTGCATACAGCCAGACTTTGCAACGGGACCAATAAAATGGACGGTGAATAACAAAGATCCTGCACTAGACAACACAAGATGCACCATTTCAAACAACAGCAGCACTCTCACTGTGAAAAACACTAGTGAAAGTGACAGTGTACCTGCCTCAGGATCTGACATCATGTTAAACTATACTACTAAAAGTTGTAAGGAGGAAACCTTTACATGCCGTCTCAAGGGTCTGCCAACACTACTTGAGTACAGTTACAGCTGGAGCAGAGTCACAGTAAATACAAGCACAGAAAATTATGACTGTGCAAATGCAGAACTTGGAATTGGAAAAACAGATCAAGAAAAGACAGGAATCTGTGGAAGTGGCTTTAAAGGCACTATAACTTACAGTTGTAAATCACATGTTTGGACACCAATACAGGACAACTGTATACTGGATGTTATCTTTGAGCTTAAAAACATAGTTGAGACCTTGCTTGTGGTGGAGATTCCAGAGTTTATGGCTAACCTCAGTAGTGCCACAGCACAGAATAATGTTAATATAACACAGTCTCCTGCTACTGTCCAAGCTATTGTGGATATACTCTTTAAAATTGCTAATTTGTCACAAGATACCGTCATCAATAAGCCAGTGATGGAGAATTTCCTAATAACAGTGAACATCATTGTATCAGTTAATGTCAGTGATACATGGAAACAACTGAACAAAGGAAACACCACAGAAAACACCAGCATTCGACTTCTGGACGCTATTGAGAAGATCAGTGACCGTCTCAAAGATGAGTTTGCGATTAATGAAACATCCATTCAGCTGAATAGAATTGCAATTGAAAACTCATTCAGTATAACATCAACACTGCCAAACTCAACTACGGAGATTGTAATACCACAGGTTCCTAATGTGACTATTGTAACCATCATAATCTTCACAACTCTTGACAATGTCCTACCTACTCGTGATACTAATAATGACAGTAGGAAATCAGATGTGCTTATCAATGGAGATGTGGTTGTTGTTAAGGTGAACCAAACAATTAACAACATTTCTTTTGCGTTTGACATTACTAATCAGTCTTTGAGAAATCCTCAGTGTGTTTTTTGGAACTTCAATCTTGACGGATGGGATTCCACTGGATGTGAAGTAAAGCCCTTAGCGAACCAAACAAGCAAGATTACATGTGAATGCAACCACACAACCTCTTTTTCAATCCTAATGTCTCCGTTTTCCATTGATAACATAGCCTTAGCCTATATAACTTACATTGGTGTAGCTATTTCAATGGCTAGCTTGGTTATATGCCTCATTATTGAGGCTATTGTATGGAAGTCGGTAAGAAGAAATGACACATCCTATATGCGACATGTGACCATAGTCAACATTGCTGTGTCCCTGCTGATCGCAAACATCTGTTTCATCATTGGAGCCGCAATCACAGATCAAGAGCAGCCAACCTCAGTGGGTCGCTGCAGTCCAGCTGTTTTCTTCATGCACTTTTTTTACCTGGCTCTTTTCTTCTGGATGCTAATTTCAGCGCTGTTTCTCTTTTACCGTACAGTCATGGTCTTGTCCCAAATGTCAAGGGCCAAAATGATGGCCATTGCCTTCATAGTCAGTTATGGTGCACCTTTGCTCATAGCGGTCATTACTGTCGCGTCAACAGCTGGACCTCAAAATTATGTTTCCAAACAAGCTTGCTGGCTGAACTGGGATGAATCTAAGGCCCTGCTGGCATTTGTGATTCCAGCTCTCACTATTGTAGCCATAAACCTTGTGGTTTTGATTGTGGTTCTGTATAAGATGTTGAGGAGAGGAGTTGGTGCCACAACTCAACCAGATGAGAAACATGCCCTTGTGGTCATTTTCCGATGTGTGGCCATTTTGACTCCTATCTTTGGTCTAACATGGGGATTTGGAATTGGAACCATGGTGTCACGTAACTTGGGTGTTCATGTGGTGTTTACAATCATCAATTCACTGCAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_00057245_00073837.mRNA True 2769 mRNA 0.41 11 57245 73837

Neighbor

gene id symbol gene type direction distance location
CI01000029_00031332_00056219 NA coding downstream 1026 31025 ~ 56219 (-)
CI01000029_00000004_00021646 NA coding downstream 34690 4 ~ 22555 (-)
CI01000029_00076210_00177393 NA coding upstream 1793 75630 ~ 178905 (-)
CI01000029_00191495_00216075 NA coding upstream 116358 190195 ~ 216191 (-)
CI01000029_00238295_00240090 NA coding upstream 164171 238008 ~ 240090 (-)
CI01000029_00351260_00374024 PTCHD4 coding upstream 277423 351260 ~ 374024 (-)
CI01000029_00400646_00402700 NA coding upstream 326482 400319 ~ 403709 (-)
G151553 NA non-coding upstream 107541 181378 ~ 183092 (-)
G151554 NA non-coding upstream 109423 183260 ~ 187937 (-)
G151603 NA non-coding upstream 234011 307848 ~ 308204 (-)
G151605 NA non-coding upstream 236689 310526 ~ 310749 (-)
CI01000029_01293143_01293964 BATF3 other upstream 1218412 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 2518329 2587549 ~ 2592379 (-)
G153891 NA other upstream 3174940 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 3632386 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 4386506 4460159 ~ 4463540 (-)

Expression


Co-expression Network