CI01000029_00191495_00216075


Basic Information

Item Value
gene id CI01000029_00191495_00216075
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 190195 ~ 216191 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_00191495_00216075.mRNA
ATTTGTTTTGAGGGAGTGGCTTGTCATTGTTTTGCTTTAAGAGTAAAGGCCTATTGCACAAATGGTTATTAAAATCACATTATGTTTCCATATGTATAGATCCAGTTGAATACATTATGGTTGTGGAAATGAATGTATCCGAAACTGTGATCAACAAAATCAGATCTTCTGTGACTGCTGTTACACTTCCAATTCAAGTGGACAACAGTACTGAAATTACATCTTTGAACATTTCAACAGTGTGTTCTCTGAATGAAACACAGTATCAGTGTAAATGTGAGGGTCTGTTTGTTTGGCCGAATGACATGTGTCACTCATACGAGGTCTGTCATGACATCACTGATGGTTCATGTACATGTATCAATGCCCTTCCAACTGATGGACAGTTCTGCCAAGCACCACTTTCTGAGTTTGAGTATGAGACTGAAATTGATGTAAGTGTCTTTGACTTGTTCCTGGTGAACTACTTACGGAATCTCATCAGAAATATCAGCCTGCCTTTGACTCTGAGCAACAGCATAAAGATCAAAGATATCGACATGACAACTGTGTGTGGGTTGAATGAAACAGTATATGAGTGCAAGTGTGAGGAGCATCATGTTTGGCCCAATGACACTTGCAGGGCCTATCACGTGTGTGATGCCATTGTGGGAGGCACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTTCGCTTTGCCAGAGAGATATAGATGAATGTCTGTTCAGTCCATCTGTATGTGGTCCAAATTCCACCTGCACAAATCAGTTGGGAAGTTATGGTTGCTTGTGTTCGGATGGATTCACTGTAACAAACTCCAGTCTCACCATCAGCATCAACAACACATGTACAGATGTGAATGAATGTCTTAAGACATCAGAGTTCTGTGGTCCAAACTCTCGTTGCACCAACTCAATTGGGAGTTACAACTGTTCCTGCTTGAGTGGGTTTACTGTAACAAACAGGAATCAGCCAATCAGCACCAGTAACCCATGCATTGATATAAATGAATGTTTTTTCAGTCCACCTGTATGCGGTCCAAATGCAAACTGCACAAATGAAACAGGAAGATTCAATTGCTCATGTTTGGATGGATTCACTGCAACAATCTCAAGTCTCCCTGTCAGCATCCATAACCCATGTACAGCCGAGCAGTCTGCCAAGCTGACACCCTTTATCACACTGTTTGGACGGTACTTCTTCAATCATTTGCCCTTCGGTATTGCATCAGCGGCTGAGCACTTCCAAAATCGTATGGAAACTGAAGTCACTGAGGGCCTGGATGGAGTAGTCTGTGACATGGATGATGTGCTTGTGTGGGGTTGTTCTCAAGAGGAGCATGATATGCACCTTCACGCAGTGCTCCAAAAGATGGAAAATGGTGAGTCAACCCAATTATTGTGCTTCGTCCCAGCGTGTAGTCAAGTTTCTCTGTCACAACATCTCAGACAAAGGAGTGTAGCCGGATCCAGCCAATTCAAAGTATCGTCATATGGACTGGGAGCAGTTCTGCTGCAAAAAGAGGGTGATGATTGGAGACCTGTTGCCTACACGTCACGGTCTCTTACTCCTGTTGAGCAAAGATACGCGCAGGTAGAAAAGGAGGCCCTGGGGCTGACCCGGGCATCACCACTTTCTGAGTTTGAGTATGAGACTGAAATTGATTTAAGTTTCTTGGACTTGTTCCTGGTGAACAACTTACGGAATCTCATCAGAAATCTCAGCCTGCCTTTGACTCTGAGCAACAGCATAAATATCACAGATATCGACTTGACTACTGTGTGTGGGTTAAATGAAACGGTATATGAGTGCAAGTGTGAGGAGCATCATTTCTGGCCCAATGAGACCTGCAGGGCCCATCAGGTGTGTGATGGCAGTGTGGGAGGCACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTCTGCTTTGCCAGAGAGATATAGATGAATGTCTGTTCAGTCCATCTGTATGTGGTCCAAATTCCACTTGCACAAATGAAATGGGAAGTTACAATTGCTCGTGTTTGGATGGATTCACTGCAACAAACTCAAATCTTCCCATCAGCATCAACAACACATGTACAGACAGCAGAGTTCTGTGGTCCAAACTCTTGTTGCACAACTCATTTGGGAGTTACAGCTGTTCCTGCTTGAGTGTTTTTACTGTAACAAATGTGAATCAACCAGTCAGCACCAGTAACTGGGGTTGTGCTGCACCACTTTCTGAGTTTGAGTTTGAGACTGAAATTGATCTGAGTTTCTTGGACTTGTTCCTGGTGAACTACTTACGGAATCTCATCAGAAATCTCAGCCTGCCTTTGACTCTGATCAACAGCATAAATATCAAAGATATTGACATGACTACTGTGTGTGGGTTAAATGAAACGGTATATGAGTGCAAGTGTGAGGAGCATCATTTCTGGCCCAATGACACCTGCAGGACCTATCAGGTGTGTGATGGCAGTGTGGGAGGCACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTCCGCTTTGCCAGAGAGTTATTGGAATGTCAATGACAATAGATCAGACTTTTGACATCAGTCTTACTGACCCTAATAGTGAGAATTTCAGATATTTATATGGAAAAATTGCACCAATAATTGAGTTCACTTATTCTAGTAAGCTAGTTGGCTACATTCCTTTTTCTGCCAGACCTACTGGCGTCAGGCCTGGTAGTGTTATAGCAGACTACACAATAGGAGCAACATCCAACAACCTTGATTTTACAGCAGCACACACAGCAGTCACTGAGTCTCTAAAGACGGAAGGAATTGCTTTAGCTGAAAATGCTTTTGCTCAAAGTGAACAAAAGGACTTCACAACAGGTAATTTATATCCTCTGCAAAAGCTGGATCTGAACTGCATACAGCCAGACTTTGCAACGGGACCAATAAAATGGACGGTGAATAACAAAGATCCTGCACTAGACAACACAAGATACACCATTTCAAACAACAGCAGCACTCTCACTGTGAAAAACACTAGTGAAAGTGACAGTGTACCTGCATCAGGCTCTGACATCCTATTAAACTATACTATTAAAAGTGGGGATTGTAAGGAGGAAACCTTTACATGCCGTCTCAAGGGTCTGCCAACACTACTTGAGTACAGTTACAGCTGGAGCAGAGTCACAGTAAAGACAAGCACAGAAAATTATGACTGTAGAGATGAAGAAATTGGACTTGGAAAAACAAATGAAGAAAAGACAGGAATCTGTAGAAGTGGCTTTAAAGGCACCATAACTTACAGATGTGAACCACCTGTTTGGACACCAGTACAGGACAACTGTGTACTTGAAGTTATCTTCAACCTTAAAAACAGAGTTGAGACATTGCTTGTGGTGGAGATTCCACAGTTTATGGCTGAACTCAGTAGTGCCACAGCACAGAATAATGTTAATATAACACAGTCTCCTGCTACTGTCCGAACTATTGTGGATATACTCTTTAAAATTGCTGATTTGTCACAAGCTACTTTAATAAATAGCATTGTGATGGAGAATTACCTAAAAACAGTGAACATCATTGTATCAGGTAATGTCAGCGATACATGGAACACATTGAACAAAGGAAACACCACAGAAAACACCAGCATTCGACTTTTGAGCTCTATTGAGAAGATCAGTGACCGTCTCAAAGATGAGTTTGCGATTAATGAAACATCAATTCAGCTGAATAGAACTACAATTAATAACTCATTCAGTATAACATCAACACTGCCAAACTCAACTACGGAGATTGTAATACCACAGGTTCCTAATGTGACTACTGTAACCATCATAATCTTCACAACTCTTGACAATGTCCTACCTACTCGTGATACTAGTAATAAAAATGACACTAATAATTCATTTGTGCGCATCAATGGAGATGTGGTTGTTGTTAAGGTGGACCAAACAATTAACAACATTTCTTTTGCGTTTGACATTACTGATCAGTCTTTGGGAAATCCTCAGTGTGTCTTTTGGAACTTCAATCTTGATGGATGGGATTCTACTGGATGTGAAGTAAAGCCCTCAGTGAATGAAACGGGAAAGGTTACATGTGAATGCAACCACACAACCTCTTTTTCAATCCTAATGTCACCGTTTTCCATTGATAACATAGCCTTAGCCTATATAACTTACATTGGTGTAGCTATTTCAATGGCCAGCTTGATTTTGTGCCTCATTATTGAGACTATTGTATGGAAGTCAGTGACAGGAAATGACACGTCCTACGTGCGACATGTCTCCATGGTCAACATTGCCGTGTCCCTGCTGATCGCAAACATCTGTTTTATCATTGGAGCTGCAATTGCAGAACAAGAGCAGCCAACCTCAGTGGGTCGCTGCAGTCCAGTGGTTTTCTTCATGCACTTTTTTTATCTGGCTCTTTTCTTCTGGATGTTAATTTCAGCGCTGTTGCTCTTTTACCGTACAGTCATGGTCTTTTCGCGAATGTCAAGGTTCAGAATGATGGTCATTGCCTTCATAGTCGGTTATTGTACGCCTTTGCTCATAGCGGTCATTACTGTTGCATCGACAGCTGGACCTCAAAAATATATTTCCAACAGAGCTTGCTGGTTGAACTGGTTTGAGTCTAAGGCACTGCTGGCATTTGTGATTCCAGCTCTCACTATTGTAGCCATAAACCTTGTGGTTTTGATTGTGGTTCTGTATAAGATGTTGAGGAGAGGATTTGGTGATCATCAACCAGATGAGAAACATGCCCTGGTGGTCATTGCCCGATGTGTGGCTATATTGACTCCCATCTTTGGTCTAACATGGGGATTTGGAATTGGAACCATGGTGTCACCAGACTATGGTGTTCATGTGGTGTTTGCACTCCTCAATTCACTGCAGGGATTCTTTATTTTGGTGTTTGGAACGATTTTAGACAGCAAGATACGTGAGGCACTGGCAAGAAGGCTGTCACTAAGGAACCTTACCAGCTCTATCCATACCAGGGTACTTGGCAACAAACTGCATCTGATTCATGAGTTCTTCATGATATATGTACTCAGTTTACAGCTGATATCTTAAATCTCTAAATTACAGAGTACTAGTGCAGGACCATCATCTTCAAGCGGACTGGGTTTGTTTAGAAGGAAACGAAGGGGAAGTAAGTAATACTATTTACAGTCTGCTGATAGACACCTGCTTTCAAATGCTCCAGCTTTCAAATTCAAAGACTTCCGTGTGCTTTCAAACGCTCCTGTGCAATGATCATTGTAGCCAATCACAGACATATATGTTGAGCGTGTGAACACAATGGCCAATCAGAGGTGTTTACGAATCCTCTCAACAGCGCTCAAAGCATCACATTTTTAATATTTCAGTACCGACTTGATATCGAAGCACCGCGCCGCTTTACTAAGGATAGGGGCCGCTCACATGTCACGTCTAAAAACGCATGGAAAGTGCAGCCGCGCCACTTTCTTTCCGAAGCGCTTGCGCTCCCGTGGCGTCTGTTGTTGCTATGCACCCATGAACTGCGCCCAACCCCAATTGATTTCTAGCCCTTGCATTAGCTCTACTACTACATACATTTATGGAGATGTTTGGCTGAGCTTTTTAATGTTTTGGCACGGAAAAAATGCAAAGATTACAGATAAAACTGCAATTAAGTTGCGATTAATCACGAGTTAACTCATGACAATCATGCGATTAATCTTGATTAAATATTTTAATTGATTGACAGCCCTTGTGTGTGTGTGTGTGTGTGTGTGTATATGTATGTGTGTGTATATATATATATATATATATATATATATATATATATATATATACAAAACATTTGTGTATATAATTTAAGTAACATAATAATTATTATTTGCAGATGGGTACAACATATCTGAAACCAGTGGTTTGTCAGCAGCAACATCTTCAAACATCTCCAGTAGCGCCAATACTTTTATGAATACATAATGGACTGCTTCGTTAGCTATAGTCTACTTCATTACCAATTAACCAACTTTTCCAAAAGTGCTTCTACATTGCAGATATACTGTATGTAAACTGCCTTTTCTATTACTGGTTTCTGGGAAGAACTGTTCTGAAGTCCTTTTAAAAAAATCAGGTTACAATTTACAAATTTGATATGTAAATAAGGGTACATTTTAGAATAATAATGACGTGGTTTATGGCATGATAAGATGTGCTTTCATATGGGTCTAGAGCAATAGCTTTGTTATTTGTTTTGTGTAATGTATTTTTTGTTCGCCATTTTAAATGAATCAGATTTGCTGCACAGTTGGTGCCATTAAATGTATCTTGTTCTATACTGTCTGGGGAAAAAAGAACAGAATCAAATTTTAAATGTTACTGCTTCACCAATAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_00191495_00216075.mRNA True 6354 mRNA 0.41 25 190195 216191

Neighbor

gene id symbol gene type direction distance location
CI01000029_00076210_00177393 NA coding downstream 11290 75630 ~ 178905 (-)
CI01000029_00057245_00073837 NA coding downstream 116358 57245 ~ 73837 (-)
CI01000029_00031332_00056219 NA coding downstream 133976 31025 ~ 56219 (-)
CI01000029_00000004_00021646 NA coding downstream 167640 4 ~ 22555 (-)
CI01000029_00238295_00240090 NA coding upstream 21817 238008 ~ 240090 (-)
CI01000029_00351260_00374024 PTCHD4 coding upstream 135069 351260 ~ 374024 (-)
CI01000029_00400646_00402700 NA coding upstream 184128 400319 ~ 403709 (-)
CI01000029_00520844_00524249 NA coding upstream 303643 519834 ~ 524342 (-)
CI01000029_00532933_00536043 NA coding upstream 316454 532645 ~ 536758 (-)
G151554 NA non-coding downstream 2258 183260 ~ 187937 (-)
G151553 NA non-coding downstream 7103 181378 ~ 183092 (-)
G151603 NA non-coding upstream 91657 307848 ~ 308204 (-)
G151605 NA non-coding upstream 94335 310526 ~ 310749 (-)
G151610 NA non-coding upstream 100444 316635 ~ 316880 (-)
G151612 NA non-coding upstream 102326 318517 ~ 326627 (-)
G151624 NA non-coding upstream 125320 341511 ~ 348897 (-)
CI01000029_01293143_01293964 BATF3 other upstream 1076058 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 2375975 2587549 ~ 2592379 (-)
G153891 NA other upstream 3032586 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 3490032 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 4244152 4460159 ~ 4463540 (-)

Expression


Co-expression Network