CI01000029_01198414_01198698


Basic Information

Item Value
gene id CI01000029_01198414_01198698
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1198345 ~ 1199494 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01198414_01198698.mRNA
ATAGTCACACCACACTTCCATATCATTACTGTTTATGGTCTGCGGTCACAGTCTGTCCAAATATACAGATCACACATACACACCTGAAGAGATATTTAAAGCACAAGGTGTGTATCCATAATGGAGAGGTGTGAAAAGACAGATGGCCGATGAGAGGTGTGCAAACACTGTACTTTTGCTGGTTTGGTGATGAAAGTGAGTAAAAAAGGCAAACATCCACAGTGACAGCATAAGAGCTGGGCAAACAGAATTATGAGCAATAATAACATGCAGATGATGACCGAATAGGAATACCTCGCCTCCTTATGCTGAAGTATTTCCATTACCTGTTCGCAATAGGTCACTCGCCAGATTTCTTGTTTAAAAATAAAGCACAAAATGTTTTTTTGTTTTTTTTTGTGTGTATTTATTGGCTTTTATTTTAGGCCCTGAACCAGTCATTCAGGCTGTTAGACTGAAAGTGCAAATAAATCATTCAGCTATTAAATAAAATGGTGGGTTGTCTGTGGAGAGAGATATCATTTTGTGATCTTATAGGAACTCATGTGTGGTTCTATTATCATCTTCTTATATATGAGATGCATGGATGCACTATTTTCATTTGATTAATTTGGTGTTCAGCCAAGAGTGTTATTTTTATTCATCATTGGTGTAGTAGACCAGTTCAGAATAATATCAGCAGTCACACTTCACTACGACTGTGTTGTCTTTCATTAAAAGACTTTATTAACATAACAATCCTTTTCATTGAATATATTCAATGAATGTCACTGCACTTGACAACCAAAAGTCAAAAATGAGCCAGTGGCTGTTAAAACGGTTTAATTGTGAGAAGGATGTCCTTCATGATCTGTGGGAAAACATGAGGACAGAATCCATGTGTGCCAAGTCCACCATGAAAAACATTTGCACTGCCGGGCATCAATGTTTTACCGCTTTCTGTCAGTTGTCAACTTCAAACGCAAAGCTTTGGTCCCACGGGATTGAGGAGTCTGCAATCACTGAGCTTTTATCTCATGGAAACATGTTAACTGCCTTTGTGCAGGGGCCCCTGTGTGGTTTCCAGGATCCTGGAAAATGAGATAGACATTCTGGGATGAGGTAGCACACACTGAAAGTCATATTGACCATGGAAAAGAAAGCAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01198414_01198698.mRNA True 1150 mRNA 0.39 1 1198345 1199494

Neighbor

gene id symbol gene type direction distance location
CI01000029_01186343_01189865 NA coding downstream 7698 1176769 ~ 1190647 (-)
CI01000029_01123207_01149937 NA coding downstream 47408 1122933 ~ 1150937 (-)
CI01000029_01109371_01118517 HIVEP2A coding downstream 78781 1108973 ~ 1119564 (-)
CI01000029_00994197_01001813 NMBR coding downstream 196532 992790 ~ 1001813 (-)
CI01000029_00805246_00806809 CITED2 coding downstream 391536 804913 ~ 806809 (-)
CI01000029_01245770_01245984 NA coding upstream 46024 1245518 ~ 1245984 (-)
CI01000029_01252971_01257256 NA coding upstream 53305 1252799 ~ 1257256 (-)
CI01000029_01293143_01293964 BATF3 coding upstream 93050 1292249 ~ 1294123 (-)
CI01000029_01294841_01297423 NA coding upstream 95230 1294724 ~ 1297423 (-)
CI01000029_01353955_01354599 NA coding upstream 154334 1353536 ~ 1354599 (-)
G152759 NA non-coding downstream 117065 1078258 ~ 1081280 (-)
G152551 NA non-coding downstream 546577 649876 ~ 651768 (-)
G152557 NA non-coding downstream 672456 525587 ~ 525889 (-)
G152556 NA non-coding downstream 673108 524840 ~ 525237 (-)
G152918 NA non-coding upstream 240015 1439509 ~ 1439718 (-)
G152933 NA non-coding upstream 255298 1454792 ~ 1455019 (-)
G152935 NA non-coding upstream 257471 1456965 ~ 1457196 (-)
G152939 NA non-coding upstream 265673 1465167 ~ 1465472 (-)
CI01000029_02589994_02592379 NA other upstream 1392672 2587549 ~ 2592379 (-)
G153891 NA other upstream 2049283 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 2506729 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 3260849 4460159 ~ 4463540 (-)

Expression


Co-expression Network