CI01000029_01252971_01257256


Basic Information

Item Value
gene id CI01000029_01252971_01257256
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1252799 ~ 1257256 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01252971_01257256.mRNA
GCAATTGAGGCCCTTGAGAATGGCGAGGTTCCAGTTGGCTGTCTAATGGTTTACAACAATGAGATTATTGGAAAAGGAAGAAATGAGGTGAATGAAACAAAAAATGCTACTCGGCATGCAGAAATGGTGGCACTGGATCAAGTGCTCGATTGGTGCCGTTTCAGAGAGAAGGACCCGAAGGAGACAGACATACCTCTTGTTGTATATGGGTGCAAAAATGAGCGGTTTGGAGGCTGTGGCTCCGTCCTGGACATCTCATCAGATCATTTACCACAGACTGGAACTACATTTAAGTGCATCGCAGGCTATAGAGCGGAAGAAGCCGTTGAAATGCTCAAGACATTTTATAAACAAGAAAACCCAAATGCTCCCAAACCTAAAGTGAGGAAAGATTTGAACAGTCCACCAGGTGGAGCTGTAGTCATTCAGTGGCTGGAAGTGGGTTTTCTGTGGGTGCGTATGAAAGAGAAATCAAGCGGTTTTGGAAGTAGATATGAGGTGTCTGAGATCTTTAGGTCTGTCATTTTTCAAAGCCTGTCGTCTTACATGGTTATGGGTTCTGCCGGCCATATCATATGAATCTGAAACATTTCCTCGGTCAGTTACTGCTCTGTTATTGTCATTGTAAGTAGAGAACCCATGGGTTTAATTGTTTTGTGATGAATGATCAGACATTGAGAGCTCACAGCTGGCTTTTTTAATATGAACATACTATCTTGATGTTGAAATGACAGGAGCTGTCATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01252971_01257256.mRNA True 751 mRNA 0.43 6 1252799 1257256

Neighbor

gene id symbol gene type direction distance location
CI01000029_01245770_01245984 NA coding downstream 6815 1245518 ~ 1245984 (-)
CI01000029_01198414_01198698 NA coding downstream 53305 1198345 ~ 1199494 (-)
CI01000029_01186343_01189865 NA coding downstream 62152 1176769 ~ 1190647 (-)
CI01000029_01123207_01149937 NA coding downstream 101862 1122933 ~ 1150937 (-)
CI01000029_01109371_01118517 HIVEP2A coding downstream 133235 1108973 ~ 1119564 (-)
CI01000029_01293143_01293964 BATF3 coding upstream 35288 1292249 ~ 1294123 (-)
CI01000029_01294841_01297423 NA coding upstream 37468 1294724 ~ 1297423 (-)
CI01000029_01353955_01354599 NA coding upstream 96572 1353536 ~ 1354599 (-)
CI01000029_01576996_01590356 ITPKB coding upstream 319083 1576339 ~ 1592127 (-)
CI01000029_01600901_01604213 NA coding upstream 343476 1600732 ~ 1605205 (-)
G152759 NA non-coding downstream 171519 1078258 ~ 1081280 (-)
G152551 NA non-coding downstream 601031 649876 ~ 651768 (-)
G152557 NA non-coding downstream 726910 525587 ~ 525889 (-)
G152556 NA non-coding downstream 727562 524840 ~ 525237 (-)
G152918 NA non-coding upstream 182253 1439509 ~ 1439718 (-)
G152933 NA non-coding upstream 197536 1454792 ~ 1455019 (-)
G152935 NA non-coding upstream 199709 1456965 ~ 1457196 (-)
G152939 NA non-coding upstream 207911 1465167 ~ 1465472 (-)
CI01000029_02589994_02592379 NA other upstream 1334910 2587549 ~ 2592379 (-)
G153891 NA other upstream 1991521 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 2448967 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 3203087 4460159 ~ 4463540 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018269 adat2 coding NC_007131.7 CM002904.2 37733181 ~ 37760481 (-)