CI01000029_01750119_01750442


Basic Information

Item Value
gene id CI01000029_01750119_01750442
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1749858 ~ 1750701 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01750119_01750442.mRNA
AGCTCGTTTATAAAGCAAAAAAGTACATCGCTGGTCCATGGTTTAATAACTTTGATTATCGTCAAAATCACAGTAAATTTAGGCTATATTTGGACATGCGATGGAGTTTTAATTAAAAACGAGTAAAAAAAATCGTCAACTAATATTATTAATACCGAATCTACTTTAAGACCGAGAAACCGAATCTTAACAATCAGCTCAATGAATGAACAATATCGACAGTCCTGTACAATATAAACACTAATATCTCATAGCTTGAATGGCCTCAAGTCAAAAAGTTGAAAGCAAGTCATATAAGGTAACTTACTCGATCGTCTTCTGTTGCTTCAAAAGTACTTGTAAGGAAGAGTGTTTGCAGACAGACTGGAGTGGAGCTCCTGTAGCTCAATGGTTATATACATCACACACCGCTCCATTGACGTCAGTGGAGCTGCATAAACTGCTTGTAAATGAGGCAATTCTGAACTGGAAGGAAGAGTGGAGTAAAGGTGCTGTAGATCCGAAGGACAAGGTGAGGCGTTTCTTTGTCTCTCCAAAGTTTTCATTCAGAAAAGATGATCTTGATGCTGTTGCAAAGTCATGAACTTTGTTCCAACTTCGGATATATTTTCTTTGAAACTGACAGGTGATCAGTGTATGGGGATACTTTGACTGTCAAATGACTTGTTTTTTAAATGCACCTGAGTAAAGTGTGCTGTCGTGATGGATTTCTGCTTGGCTGGTCATTTGTGGTCAGGAGGAGAGCAGAAGCGCGCGACGGGGACACGAGAGGCTCTGACTCTGTCCAAGGTGCTGAAATTCAAGATGCAGCCAGACCTCATTGGTTCATTTATATTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01750119_01750442.mRNA True 844 mRNA 0.39 1 1749858 1750701

Neighbor

gene id symbol gene type direction distance location
CI01000029_01688033_01695159 SLC30A3, SLC30A2 coding downstream 54625 1687857 ~ 1695233 (-)
CI01000029_01645824_01650080 NA coding downstream 99778 1645715 ~ 1650080 (-)
CI01000029_01600901_01604213 NA coding downstream 144653 1600732 ~ 1605205 (-)
CI01000029_01576996_01590356 ITPKB coding downstream 157731 1576339 ~ 1592127 (-)
CI01000029_01353955_01354599 NA coding downstream 395259 1353536 ~ 1354599 (-)
CI01000029_01758347_01773935 TRIM54 coding upstream 7610 1758311 ~ 1773935 (-)
CI01000029_01783528_01785599 DNAJC5G, DNAJC5GA coding upstream 32762 1783463 ~ 1785599 (-)
CI01000029_01788875_01811689 CAD coding upstream 38088 1788789 ~ 1811689 (-)
CI01000029_01812895_01814632 NA coding upstream 62104 1812805 ~ 1814632 (-)
CI01000029_01943164_01970772 RCAN2 coding upstream 191944 1942645 ~ 1971005 (-)
G152775 NA non-coding downstream 90353 1658989 ~ 1659505 (-)
G152989 NA non-coding downstream 129564 1619702 ~ 1620294 (-)
G152965 NA non-coding downstream 222254 1526723 ~ 1527604 (-)
G152964 NA non-coding downstream 224832 1524813 ~ 1525026 (-)
G152939 NA non-coding downstream 284386 1465167 ~ 1465472 (-)
G152742 NA non-coding upstream 86395 1837096 ~ 1851027 (-)
G152748 NA non-coding upstream 102380 1853081 ~ 1853608 (-)
G153085 NA non-coding upstream 184240 1934941 ~ 1937564 (-)
G153102 NA non-coding upstream 329371 2080072 ~ 2080284 (-)
G153105 NA non-coding upstream 345134 2095835 ~ 2096082 (-)
CI01000029_01293143_01293964 BATF3 other downstream 455735 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 841465 2587549 ~ 2592379 (-)
G153891 NA other upstream 1498076 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1955522 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2709642 4460159 ~ 4463540 (-)
G154415 NA other upstream 3235407 4986108 ~ 4990990 (-)

Expression


Co-expression Network