CI01000029_02099152_02101364 (CCDC25)


Basic Information

Item Value
gene id CI01000029_02099152_02101364
gene name CCDC25
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2099012 ~ 2102007 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02099152_02101364.mRNA
ATTTATTTTCTGGGCGCCAATAAGCAAAATCTTTCTAAAAATACATGTTGGATAAGATCATCATCACGAATCTCATTTAAATACGGACATGATAACTATATCTGTAGTTGATAACTTACCAGATAAAATAAATCCGATTCCGTTTTTTGATTTGTGTGAAAACACTGGAACTAAATAATTGCGGCAAATCTCTCCCCTTCACCCGCGATCTGTTTTGAACACCGCGCCAAAGTCAATTGTGGCGCACACGGAAACGGAAACAGCGTATGTTTCATGACAACATCCGGTTTGTAATGGGAAGTCAGATTCATCTCCGCGAATCGGTTCTTTTGGACAGTTTGATTCAAAGAACCGGTTTAGTACGTTCAAGTTTGTTGTCATTTAGAATCTGAATAACATCTACGTTAAACACAAAATAAATGTACATTAGCCTGCAAAAGTTTTTATTTATTTATTAAAATCAACTCTTGATTCGTGTCTGAATTCGGAACCTCATACTACTATACTCCTCATACTACTTTTACCAAAATGGCAGAAATAATAAGAGTAGTATGCTAGTATGCAGTTGCTGATGTGAGGACAGTTCGGACCGTCTATTGTGAATAGTTCAGACCATAACCATATATAAAATACATTATTTTATATGTCTGAAGCGTATACAGTCTATGGTTCAGACCCGTTCAACCAATTCATTAAAAAGATCCGATTCAATCAAACAATTCTTACACGAATCGCTACTTCATTGCAGCGCTGCTTGGTTCCTGTTGTGTGTTTTGCTGAATACACATATAGTGAGACCTTACAAAGGTTGTGTTTATGCGGAAAGATGGTGTTTTACTTTAAAAGCGACGTTGTCTCACCGCCCTATATCATCTACATGGGCAAAGATAAATATGAAAATGAAGATCTTATAAAATATGGATGGCCTGAAGATATTTGGTTCCATGTGGACAAGCTCTCATCTGCTCACGTATATCTAAGAATGCCCAAGGGTGTAACGATAGAAGACATACCAAAAGAAGTCCTGATTGACTGTGCCCAGCTGGTCAAAAACAACAGTATTCAAGGATGCAAAATGAACAATATTAATGTTGTCTACACACCATGGGGCAATCTGAAAAAAACAGCAGACATGGATGTCGGTCAGATAGGCTTTCATCGACAGAAGGAGGATGGCTATGATTCAGACGACTTCATGTAAAGTAAAGGAATGGATCTGCGATAATGAAGAACCACCATCTTCTCCCCACAGTATCTAAGTTTGTCATTGCACTTTCAAAGGACGCCATAGCGGTCATCAGAAATGAGCGATCAATAGGAATCAGTACTTGTGCCAATAAA

Function

symbol description
ccdc25 Predicted to enable DNA binding activity. Predicted to be involved in positive regulation of cell motility. Predicted to be located in endomembrane system. Predicted to be integral component of plasma membrane. Orthologous to human CCDC25 (coiled-coil domain containing 25).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02099152_02101364.mRNA True 1341 mRNA 0.38 8 2099012 2102007

Neighbor

gene id symbol gene type direction distance location
CI01000029_02054840_02058175 NA coding downstream 40626 2054493 ~ 2058386 (-)
CI01000029_02029449_02036156 CYP39A1 coding downstream 62856 2029426 ~ 2036156 (-)
CI01000029_01943164_01970772 RCAN2 coding downstream 128007 1942645 ~ 1971005 (-)
CI01000029_01812895_01814632 NA coding downstream 284380 1812805 ~ 1814632 (-)
CI01000029_01788875_01811689 CAD coding downstream 287323 1788789 ~ 1811689 (-)
CI01000029_02107558_02110456 PBK coding upstream 5323 2107330 ~ 2111349 (-)
CI01000029_02114824_02116942 SLC35D3 coding upstream 12585 2114592 ~ 2119568 (-)
CI01000029_02125408_02143865 PEX7 coding upstream 23315 2125322 ~ 2143865 (-)
CI01000029_02145528_02148347 HEY2 coding upstream 42443 2144450 ~ 2149108 (-)
CI01000029_02159023_02164894 NA coding upstream 56830 2158837 ~ 2165128 (-)
G153105 NA non-coding downstream 2930 2095835 ~ 2096082 (-)
G153102 NA non-coding downstream 18728 2080072 ~ 2080284 (-)
G153085 NA non-coding downstream 161448 1934941 ~ 1937564 (-)
G152748 NA non-coding downstream 245404 1853081 ~ 1853608 (-)
G152742 NA non-coding downstream 247985 1837096 ~ 1851027 (-)
G152762 NA non-coding upstream 11417 2113424 ~ 2114309 (-)
G153134 NA non-coding upstream 123710 2225717 ~ 2227563 (-)
G153161 NA non-coding upstream 341656 2443663 ~ 2444082 (-)
G153162 NA non-coding upstream 343144 2445151 ~ 2445890 (-)
G153163 NA non-coding upstream 345123 2447130 ~ 2447590 (-)
CI01000029_01293143_01293964 BATF3 other downstream 804889 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 490159 2587549 ~ 2592379 (-)
G153891 NA other upstream 1146770 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1604216 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2358336 4460159 ~ 4463540 (-)
G154415 NA other upstream 2884101 4986108 ~ 4990990 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location