CI01000029_02125408_02143865 (PEX7)


Basic Information

Item Value
gene id CI01000029_02125408_02143865
gene name PEX7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2125322 ~ 2143865 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02125408_02143865.mRNA
ATGATCTCCCCAAAAACATCACACGGGCAAAGAGTCAGTGGTGTGAACGTGGTCAGACGTCATGGATATGCGGTGGAGATTTCACCCTTTCTCGCTTCTACGGTCGCATGTGCTTCCTCTCAGTATTATGGAATAGCAGGATGTGGGACACTTCTTGTGCTGGAGCAGAGAGAGGCAGATGTTTCACTTGTGAGGAGTTTTGACTGGAATGATGGCCTCTTCGATGTGACGTGGAGCGAGAGCAATGAACATGTGCTGGTGACGGGAGGAGGTGATGGATCTTTGCAGATCTGGGACACAGCCAACCCACAAGGTCTTCTGCAGGTGCTGAAAGGGCACACACAAGAGGTGTATTCAGTAGACTGGAGTCAGACACGGGGAGAGAACCTGGTGGTATCAGGATCTTGGGACCACACGGCCAAAGTGTGGGATCCGGAGAGATGTCAGTTAGTGACCTCCCTGCAGGGTCATGAGGGTGTCATATACAGCACCATCTGGTCTCCTCATATCTCAGCATGCTTTGCTTCAGCCTCAGAGACAATTTCAGCACCACCCTTATCAGAGATTTCACCTCCTCCCGCTCAATGCAGTGATAGCAGGAGCCCTGGCTTCTCTGACGAGGATGCCAGTGAGATCATTAATGCAAAACGCTTACATGCCAACAATCTCAGGGACGGGACACTGCGAGTTTGGGATGTGAAAGCGGGATCCTGCAGGCTGGCCATTCCTGCACACAGGGCTGAAGCCCTCAGCTGTGATTGGTGCAAATACGACCAGAATGTTCTGGTCACTGGATCCGTGGACTGCAGTCTCCGAGTGTGGGACTTAAGGAACATCCGAAATCCTGTAGCTCAAATGATGGGCCATTCTTACGCCATCCGCAGAGTAAAGTTCTGCCCATTTTACAAGACCATCCTCGGGTCCTGCTCATATGATTTCACAGTCAGATTCTGGGACTACTCCAAGAGCCAGCCGCTGCTGGAGACACTGGAGCACCACTCAGAGTTTGTGTGTGGCCTGGATTTCAACCTGCACATCCCGAACCAGCTATCACTTTCTATTAACCCTCACTGTACGGGCTTTTCTGTTAACCTCACTTCACCTGAGATGCCTGTCTGTTGTGGAAAACAATCATCGACGGAAAGGTGGCATGCTTTGTTCGTAGAGCGCATACATGGAATGGGTCACGTACAGTAACAGAGCACTCAGCTCATTGAGATGTGGGCCGCAGTCCTCAGGGGAGCTGGTCCTGTCTGACGCAGGCACTCACAGTGATGAATAAA

Function

symbol description
pex7 Predicted to enable peroxisome matrix targeting signal-2 binding activity. Predicted to be involved in protein import into peroxisome matrix. Predicted to be active in cytosol and peroxisomal matrix. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and rhizomelic chondrodysplasia punctata type 1. Orthologous to human PEX7 (peroxisomal biogenesis factor 7).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02125408_02143865.mRNA True 1283 mRNA 0.51 12 2125322 2143865

Neighbor

gene id symbol gene type direction distance location
CI01000029_02114824_02116942 SLC35D3 coding downstream 5754 2114592 ~ 2119568 (-)
CI01000029_02107558_02110456 PBK coding downstream 13973 2107330 ~ 2111349 (-)
CI01000029_02099152_02101364 CCDC25 coding downstream 23315 2099012 ~ 2102007 (-)
CI01000029_02054840_02058175 NA coding downstream 66936 2054493 ~ 2058386 (-)
CI01000029_02029449_02036156 CYP39A1 coding downstream 89166 2029426 ~ 2036156 (-)
CI01000029_02145528_02148347 HEY2 coding upstream 585 2144450 ~ 2149108 (-)
CI01000029_02159023_02164894 NA coding upstream 14972 2158837 ~ 2165128 (-)
CI01000029_02203122_02221481 TPD52L1 coding upstream 58915 2202780 ~ 2221481 (-)
CI01000029_02231187_02248416 NA coding upstream 87322 2231187 ~ 2249491 (-)
CI01000029_02254888_02257580 NA coding upstream 111012 2254877 ~ 2257580 (-)
G152762 NA non-coding downstream 11013 2113424 ~ 2114309 (-)
G153105 NA non-coding downstream 29240 2095835 ~ 2096082 (-)
G153102 NA non-coding downstream 45038 2080072 ~ 2080284 (-)
G153085 NA non-coding downstream 187758 1934941 ~ 1937564 (-)
G152748 NA non-coding downstream 271714 1853081 ~ 1853608 (-)
G153134 NA non-coding upstream 81852 2225717 ~ 2227563 (-)
G153161 NA non-coding upstream 299798 2443663 ~ 2444082 (-)
G153162 NA non-coding upstream 301286 2445151 ~ 2445890 (-)
G153163 NA non-coding upstream 303265 2447130 ~ 2447590 (-)
G153164 NA non-coding upstream 303750 2447615 ~ 2447842 (-)
CI01000029_01293143_01293964 BATF3 other downstream 831199 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 448301 2587549 ~ 2592379 (-)
G153891 NA other upstream 1104912 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1562358 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2316478 4460159 ~ 4463540 (-)
G154415 NA other upstream 2842243 4986108 ~ 4990990 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location