CI01000029_02159023_02164894


Basic Information

Item Value
gene id CI01000029_02159023_02164894
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2158837 ~ 2165128 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02159023_02164894.mRNA
AATGAGGGATGAAGCCAAACAACCGGCAACCCTCCATTTGGAAGAGAGCGCTTAGTCTAACATGCAGCATGCAGAACTGCAAGCCTACACATATAGTTATTTCCATATGATCATGCAGTGCTTTGCTACCACTAGACCAGTCACTTGTTTTCTGTCAGACTGACTCAGACACTCTGTTTCAAATGCTGAGCGTTGATTTAAGGCCACACACACTCTGCCCTCTGTTGATGCTTCATGAGTCAACATGCAGGGCTCATGAGAAAGAGTGTCTCACAGACTTTATTTAGACCCTTGAAGAATGTCCGCCTCCCTCCCAGTCAATGCCACAAGTCTTTCTCCACATCCAGTATTCCCAAGGTGAATCATTCTCCAGCTCCGGGTCAAGACCCTCATAACGCCGTTTCCTCAGTCGGAATGGCCCATGCAGTTTTCTCTGTGAGAGAGAGGCCGATTGAGTCTCCAGCTGCCATCACACAAAAACATCTTCACAGGCGTGCGGCAGCAGCAACCATGTGGGAAAGACAGCGTGAGAGTGTCTGGGAGCTGTCGTGGACACCTCTCCCTCTACGTTTCTCCTGGTGTGAATGTAGCAAGATTCCTGCAGCTGATCGCGGCGGCTATTCTGATGACAGGTATTTTCCAGGGCTCGGACCCTCAGTCCAGGTTTTCCCCTGCAGGGTGTATAAAGATTTAGCAGACGTGTTGCTGATCTGGGGTCTGCGTATGGTCAGCTGGTGGCCCTCACTCAGCTTGATAAGATGAACTGAGCCTGCTGTTGTCACATTCTCCCCCAGATTCAACAGTGCTGTCTCGGGTGATAGCAGTAAGACCAGAGGGCCTCGGGTCAAGCATGTGCGCTACTGCTTTTCAACTGCTTGCACTGATAAGTCAAAGTGTCTGGACTTCCAAAACAATTACGGGGGGCCAGCCAATCGGACCTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02159023_02164894.mRNA True 948 mRNA 0.50 3 2158837 2165128

Neighbor

gene id symbol gene type direction distance location
CI01000029_02145528_02148347 HEY2 coding downstream 9729 2144450 ~ 2149108 (-)
CI01000029_02125408_02143865 PEX7 coding downstream 14972 2125322 ~ 2143865 (-)
CI01000029_02114824_02116942 SLC35D3 coding downstream 39269 2114592 ~ 2119568 (-)
CI01000029_02107558_02110456 PBK coding downstream 47488 2107330 ~ 2111349 (-)
CI01000029_02099152_02101364 CCDC25 coding downstream 56830 2099012 ~ 2102007 (-)
CI01000029_02203122_02221481 TPD52L1 coding upstream 37652 2202780 ~ 2221481 (-)
CI01000029_02231187_02248416 NA coding upstream 66059 2231187 ~ 2249491 (-)
CI01000029_02254888_02257580 NA coding upstream 89749 2254877 ~ 2257580 (-)
CI01000029_02359382_02359992 NA coding upstream 193885 2359013 ~ 2359992 (-)
CI01000029_02502175_02516608 CLVS2 coding upstream 337028 2502156 ~ 2517380 (-)
G152762 NA non-coding downstream 44528 2113424 ~ 2114309 (-)
G153105 NA non-coding downstream 62755 2095835 ~ 2096082 (-)
G153102 NA non-coding downstream 78553 2080072 ~ 2080284 (-)
G153085 NA non-coding downstream 221273 1934941 ~ 1937564 (-)
G152748 NA non-coding downstream 305229 1853081 ~ 1853608 (-)
G153134 NA non-coding upstream 60589 2225717 ~ 2227563 (-)
G153161 NA non-coding upstream 278535 2443663 ~ 2444082 (-)
G153162 NA non-coding upstream 280023 2445151 ~ 2445890 (-)
G153163 NA non-coding upstream 282002 2447130 ~ 2447590 (-)
G153164 NA non-coding upstream 282487 2447615 ~ 2447842 (-)
CI01000029_01293143_01293964 BATF3 other downstream 864714 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 427038 2587549 ~ 2592379 (-)
G153891 NA other upstream 1083649 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 1541095 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 2295215 4460159 ~ 4463540 (-)
G154415 NA other upstream 2820980 4986108 ~ 4990990 (-)

Expression


Co-expression Network