CI01000029_02956475_02956765


Basic Information

Item Value
gene id CI01000029_02956475_02956765
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2955888 ~ 2970825 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02956475_02956765.mRNA
CTATATAAAGCTATTATCAGCCGATAATGATCAGCACCCTTTCATTCGGAGCACCCTTCAACTCTTAAAGGGATAGTTCACCCAAAAATAAAAATTCTGTCATCATTTACTCACCCTCAAGTAGTTCCAAACCTGTATGAATTTCTGAACACACAAGAAGATATTTGGAAGAATGTCAGTAACCAAACAGGTCTCGTCCCCCATTGACTACCACTGTATTTATTTTTCCTACTATGGTAGTCAATGGGGGGCGAGATCTGTTTGGTTGCTGACATTCTTCAAATAAGAAAAGCATACAGGTTTGAAACTACTTGAGGGTGAGTAAATGATGACAGAATTTTTATTTTTGGGTTAACTATCCCTTTAACACATTTCAGTTGCACTAGCGGGACAAATGGTTGGAGTCTGGAGCTCTGACATGGATACCCTGCTGATCTGAGGGATAAAAATGAGACATGGGTAGGTGCTTTTATTGGGTGCCTGTTTACACTAAAACCATGTGACTAAGCCCTACTACCTTATTTTAGTTGCCTAGCAAATTGCAAACAATGGCAATCTGATAAAAGCCGCTTAAGCAACATAATTACATGAACTCTGAAGCATTCGTTCAAGCTCTGCAGGCAGGGCAGAGCTGGATAAATGATGCCGTCAGTGCTAATGATCATAACATCTGTTTCATCATCGTAACTGCTGCCCAGACCTTCGTACACTCTCTCAGTCTTACTGCAGTAGTCTCCATATATTCTTTCGGGAGGGATTTGGGGTGGGAACACGGGTATTCCTCGGTGTTGTGTCTCGAAGACTCAAACATATTACAGCTCATTAGCAGTCCGTGGGCCGATGGCTCGTTATTGCCGTTATTTTTCCTGAATGATTAAAAATGCATTTGACTTGTTTACAGTAGGCAAAGGAAATTAATCATCCTCACTCGGTCCACAGTCGTTTGTTTCTGTCAGGAGACATCTTTACTGTAAATACATGCGGCATTCTTTTGTAGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02956475_02956765.mRNA False 1001 mRNA 0.41 1 2955888 2956888

Neighbor

gene id symbol gene type direction distance location
CI01000029_02904113_02950205 NA coding upstream 4565 2903780 ~ 2951323 (+)
CI01000029_02860076_02868432 NA coding upstream 86951 2858909 ~ 2868937 (+)
CI01000029_02772065_02813214 TBC1D32 coding upstream 141397 2772065 ~ 2814491 (+)
CI01000029_02750295_02751549 NA coding upstream 204330 2747982 ~ 2751558 (+)
CI01000029_02684591_02727897 NA coding upstream 227721 2682519 ~ 2728167 (+)
CI01000029_02976262_03013586 MAN1A1 coding downstream 19219 2976107 ~ 3013913 (+)
CI01000029_03166200_03260925 FAM184A coding downstream 209312 3166200 ~ 3260925 (+)
CI01000029_03266557_03286137 NA coding downstream 309595 3266483 ~ 3286145 (+)
CI01000029_03291762_03308373 NA coding downstream 334874 3291762 ~ 3308793 (+)
CI01000029_03324084_03378615 CEP85L coding downstream 367196 3324084 ~ 3378615 (+)
G152446 NA non-coding upstream 219837 2735816 ~ 2736051 (+)
G152433 NA non-coding upstream 331141 2624445 ~ 2624747 (+)
G152432 NA non-coding upstream 331979 2623482 ~ 2623909 (+)
G152426 NA non-coding upstream 341605 2613991 ~ 2614283 (+)
G152424 NA non-coding upstream 345134 2610530 ~ 2610754 (+)
G152522 NA non-coding downstream 95607 3052495 ~ 3052730 (+)
G153405 NA non-coding downstream 186099 3142987 ~ 3184240 (+)
G153423 NA non-coding downstream 234705 3191593 ~ 3201635 (+)
G153430 NA non-coding downstream 439957 3396845 ~ 3490373 (+)
G153449 NA non-coding downstream 497422 3454310 ~ 3456618 (+)
G152451 NA other upstream 192949 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 1427989 1526754 ~ 1527899 (+)
G151495 NA other upstream 2583966 366541 ~ 371922 (+)
G151415 NA other upstream 2730643 170521 ~ 225245 (+)
G153475 NA other downstream 588237 3545125 ~ 3562004 (+)
G153790 NA other downstream 1776701 4733589 ~ 4740107 (+)
G154587 NA other downstream 2314132 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2500353 5461497 ~ 5470346 (+)
G155079 NA other downstream 3325797 6282685 ~ 6288398 (+)
CI01000029_03499444_03499713 NA coding downstream 502255 3499193 ~ 3500186 (+)

Expression


Co-expression Network