CI01000029_02750295_02751549


Basic Information

Item Value
gene id CI01000029_02750295_02751549
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2747982 ~ 2751558 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02750295_02751549.mRNA
CTATAAATGGATGACGAGGATAAGGAAATTGTGTCCAAAATTTGCCCTTTCATGTGGTGTGTGTGTGTGTGTGTGTTTTATCATTGAGTGTGAACAACCATATTCTGTCTGCACTGTACAGAATACACCACTTCATAGAACCGCAAGTAAAAGTAATGTTTTCCCATTTTCTCCCATAATTATGGTTTCTGTGGAGAATATAGGAAATAGCTGTGGTGAAACTATACATGAGAGCTGGACAAAGTTCAAACATGCATGCTAACATACATACTTGTTTCAATTTATTCATTTGGCAGATGCTTTTATACCCAAATAAATCCTTTGCTTTTGTACCACAGTCAGGCATTGATATTAAAATACATTTTACAGAACTGTTATCTGAATATTATCAAAACACTATATTGTTTAAACCCATAACATATAAACAGCATAACATATTGTAATGATGGTGGCCTTTGGTCTACATCTTCAATGCTTTGGATTACATAAGATATTTTTGCAAACATTTATGAAGTGCAAACTGTCAGACCTTTCCTTTTAACATTGCGTTTACTGTATGTGTTTTTGTGATTTTGAAAGCGCTGTCTATGGAAACGGCAATTTCATCACATTTCTCATGATCATGTGGGAGGTGACTCTTTTTTGGTTTCATGTATTGCAACATCTTGAGGCAAAGCTGGACAATGTAAAGATCGGTGTGATGAAAATCTGAGTGTGTGTGTGATTTTGCATGTGTGTGTACGTGCTCATTGACCTGAAGTTTTTTTTGTGGGTGGTCACCAAATGAAAGCTACACTTATAAAAATTACAAAACGTGTTGAAGATCAGATCTTGAAACCTCTGATATCATCTTTTCGCCTGCACACAATTAAAGAACAAGTTTCACAGGACCTGCCATCATAAAAATAAGGTAGGTTAACCTCGGATATGGAATTACACTCTTCTTGGCACTCTACCATTTATTGATGATTGGAATGATTGTTTTTATTTAAAACAACCTGTTTTTCTTATTGCTGATAGGCCACATATTTTGATTATGTTGGTGTTGTACTATTCTTTATTATAGCAAAACACATATATTTGCTTGTATTCTTTCCTCAATTTTACATTTTAACTTTAATGAAATTAATTATTTTAATTATTTTAAATGACAGTTATGAACTTGAGTCGAACTGATTACATACACAATTAAAAGTGATGGACCATTGAGTTGAAAAATAATAGAAAAAAAACCCAAAACAAAGTATTATTTGATCAGAGTTGTTATATATATATAATATATTCTCTGATTTTCGACTCCCCCATTCATTTTCATGGGTGGTCATTTTGACCAATATAAGCTCAGATCAATGAGGCCTACGATCAATCAGTTTCAAAAATAAATACAAAACCTGTCCTAATTTAAAGAAAACAAGTTAATAAAAAGATTGTATCCAGTATTTGATGATAAAATTGCGTAACAAGTGATTTATAAGCTATTTTTGTAGGCCGGTCATTTTTGACCGGGAACACCACAAGTGTGACTTTGTGCCATTTTGTAATAAATAAAAACCAAAATAAAACCATTTCAAAACAAATTCCCTGCTTAAACATTAAAGCATTCATATTTTTTGTAAAATTGACAAAATAATCCACAAATAACGCTTTTTTCATTCAAAAACTGAGGTACATAAGCTCAGATGAATGAGGCCTACGATCGATCAGTTCCAAATATATATATATATATATATATATATATATATATATGAGAAACCTGTCCCAATTGAAAGAAAACAAGTTGACAAAAAGATTGAATCCAATATTTAGTGATAATGTAGCATAATGAAAGATTTATAAGCAATAAGTCATTTTTGACCGGGAACACCACGAGTGTTACAATGTGGAAAAAAACCCACAAAAAAATTACAAAAAGTATCAAAATTTTTGGGAAATTGTTAGACTCTGGGTGAGTAAAGTCAGTAAATTTTAGTCCAATGCGATAACATTAACTAGCACTGAATGGCCGTTGACGGCTTGGAGCTCACATCTCTGAAAACGTCTAAACAAATTGTAAAAGTAAAATAGTCATATATTTCAGGTCTAAACAACTAAACAATTACATTCTCGCCTAAAAAACTACAGTTAAAACTACATCAAGTGTAGTATTTGTAAAAAATACGGTTGATTTGCTCATGGTGAAAACATAGGAGTGCTGTTATCACTAGAATAGTGGATGGCTCTCAACCAATCAGATTCAAGAACCAGAAAGAATTATATATATATATATTCTCCCATTGTACTTTCCCTCAGAAATCTTCTCATTTGCAGGTCAGCATGGGAGACTGGGGATTCCTCTCCAAACTTTTAGACAAAGTGCAGTCTCACTCAACCAATATTGGAAAGATTTGGCTGACAGTTCTGCTGATCTTCAGAATAATGGTTCTTGGGGCTGGACTGGATAAAGTCTGGGGAGATGAACAGTCCAGTATGGTCTGCAACATCAACACTCCTGGTTGCCTGAATGCATGCTACGACCATATCTTCCCCATTTCCCATATGAGATTCTGGGTGCTCCAAATCATCTTTGTGGCCACGCCAAATCTGGTTTACCTCGGCTACGTTCTGCACGTCATCCACAAAGAAAACAAACTGAGACAGCAATTACAAAACCAGCCAGAGAAACATGGCATCAAACAACCCAAATTCACTGATGACAACGGGAAGATTTATTACAAAGGGAGCCTGCTTGGTTGCTATATGTTGAGTATCTTTGTGACTCTTTTGTTTGAATCAGGGTTTATTGTAGGCCAGTACTATTTAATTGGGCTTTGGATGCCCACACAGCTAGAATGTAATGTAGACCCTTGCCCTAAAATTGGCCTGCATTGTTTTACATCCCGCCCAACTGAAAAGAGCATCTTTATTATCTTCATGCTTGTTGTGGCGTGTGTGTCTTTGGCTTTGAATCTAGGGAGGCGTATGAAGACCACAAATCACAATGCGTTGGAAAATCAGGAAAAGAAGTCACCAATGCATCTTCAATGCATGAAATATTTCAGACAGAACAACACAATATTATATAGCCGTGAAAAAACAAAACAATTAATACGCTTATAAAACGAACAA

Function

NR:

description
Cx32.2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02750295_02751549.mRNA True 3105 mRNA 0.35 2 2747982 2751558

Neighbor

gene id symbol gene type direction distance location
CI01000029_02684591_02727897 NA coding upstream 19815 2682519 ~ 2728167 (+)
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding upstream 160285 2583370 ~ 2587697 (+)
CI01000029_02488613_02490983 NA coding upstream 256955 2488350 ~ 2491371 (+)
CI01000029_02445216_02480549 NA coding upstream 267318 2444973 ~ 2480664 (+)
CI01000029_02432238_02441531 NA coding upstream 306393 2432238 ~ 2441589 (+)
CI01000029_02772065_02813214 TBC1D32 coding downstream 20507 2772065 ~ 2814491 (+)
CI01000029_02860076_02868432 NA coding downstream 107351 2858909 ~ 2868937 (+)
CI01000029_02904113_02950205 NA coding downstream 152222 2903780 ~ 2951323 (+)
CI01000029_02956475_02956765 NA coding downstream 204330 2955888 ~ 2970825 (+)
CI01000029_02976262_03013586 MAN1A1 coding downstream 224549 2976107 ~ 3013913 (+)
G152446 NA non-coding upstream 11931 2735816 ~ 2736051 (+)
G152433 NA non-coding upstream 123235 2624445 ~ 2624747 (+)
G152432 NA non-coding upstream 124073 2623482 ~ 2623909 (+)
G152426 NA non-coding upstream 133699 2613991 ~ 2614283 (+)
G152424 NA non-coding upstream 137228 2610530 ~ 2610754 (+)
G152465 NA non-coding downstream 150102 2901660 ~ 2992153 (+)
G152522 NA non-coding downstream 300937 3052495 ~ 3052730 (+)
G153405 NA non-coding downstream 391429 3142987 ~ 3184240 (+)
G153423 NA non-coding downstream 440035 3191593 ~ 3201635 (+)
CI01000029_01526863_01527414 NA other upstream 1220083 1526754 ~ 1527899 (+)
G151495 NA other upstream 2376060 366541 ~ 371922 (+)
G151415 NA other upstream 2522737 170521 ~ 225245 (+)
G152451 NA other downstream 10036 2761594 ~ 2762939 (+)
G153475 NA other downstream 793567 3545125 ~ 3562004 (+)
G153790 NA other downstream 1982031 4733589 ~ 4740107 (+)
G154587 NA other downstream 2519462 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2705683 5461497 ~ 5470346 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017558 cx28.1 coding NC_007131.7 CM002904.2 40739964 ~ 40774857 (+)