G152446


Basic Information

Item Value
gene id G152446
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2735816 ~ 2736051 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU173156
AACTGTTTTCAACATTGACAATAATAAGAAATGTTTCTTGAGCAGCAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTTGAGTAATGATACTTTGCCATCACAGGAATAAATCACAAAACTGAAAACAGCTATTAAACTGTTAAATTAATATTTCACAATATTACTGTTTTTACTGTATTTTGATTAAAAAATTCAGCTCTTGGTGAGGATAAGAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173156 True 236 lncRNA 0.30 1 2735816 2736051

Neighbor

gene id symbol gene type direction distance location
CI01000029_02684591_02727897 NA coding upstream 7649 2682519 ~ 2728167 (+)
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding upstream 148119 2583370 ~ 2587697 (+)
CI01000029_02488613_02490983 NA coding upstream 244789 2488350 ~ 2491371 (+)
CI01000029_02445216_02480549 NA coding upstream 255152 2444973 ~ 2480664 (+)
CI01000029_02432238_02441531 NA coding upstream 294227 2432238 ~ 2441589 (+)
CI01000029_02750295_02751549 NA coding downstream 11931 2747982 ~ 2751558 (+)
CI01000029_02772065_02813214 TBC1D32 coding downstream 36014 2772065 ~ 2814491 (+)
CI01000029_02860076_02868432 NA coding downstream 122858 2858909 ~ 2868937 (+)
CI01000029_02904113_02950205 NA coding downstream 167729 2903780 ~ 2951323 (+)
CI01000029_02956475_02956765 NA coding downstream 219837 2955888 ~ 2970825 (+)
G152433 NA non-coding upstream 111069 2624445 ~ 2624747 (+)
G152432 NA non-coding upstream 111907 2623482 ~ 2623909 (+)
G152426 NA non-coding upstream 121533 2613991 ~ 2614283 (+)
G152424 NA non-coding upstream 125062 2610530 ~ 2610754 (+)
G152421 NA non-coding upstream 127238 2608271 ~ 2608578 (+)
G152465 NA non-coding downstream 165609 2901660 ~ 2992153 (+)
G152522 NA non-coding downstream 316444 3052495 ~ 3052730 (+)
G153405 NA non-coding downstream 406936 3142987 ~ 3184240 (+)
G153423 NA non-coding downstream 455542 3191593 ~ 3201635 (+)
CI01000029_01526863_01527414 NA other upstream 1207917 1526754 ~ 1527899 (+)
G151495 NA other upstream 2363894 366541 ~ 371922 (+)
G151415 NA other upstream 2510571 170521 ~ 225245 (+)
G152451 NA other downstream 25543 2761594 ~ 2762939 (+)
G153475 NA other downstream 809074 3545125 ~ 3562004 (+)
G153790 NA other downstream 1997538 4733589 ~ 4740107 (+)
G154587 NA other downstream 2534969 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2721190 5461497 ~ 5470346 (+)

Expression


Co-expression Network