G152421


Basic Information

Item Value
gene id G152421
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2608271 ~ 2608578 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU173120
GTCTTGCATACGTCTGTGCGTAGTCATTCTTGAAGCACTGACTCCAGCTGCAGTCCACTCTTTGTGAATCTCCCCCACATTTTTGAATGGGTTTTGTTTCACAATCCTCTCCAGGTTGCGGTTATCCCTATTGCTTGTACACTTTTTTCTACCACATCTTTTCCTTCCCTTTCGCCTCTCTATTAATGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCTTTTGTGTCTTGCCCTCCTTGTGCAAGGTGTCAATGGTCGTTTTTTGGACAACTGTCAAGTCAGCAGTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173120 True 308 lncRNA 0.46 1 2608271 2608578

Neighbor

gene id symbol gene type direction distance location
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding upstream 20574 2583370 ~ 2587697 (+)
CI01000029_02488613_02490983 NA coding upstream 117244 2488350 ~ 2491371 (+)
CI01000029_02445216_02480549 NA coding upstream 127607 2444973 ~ 2480664 (+)
CI01000029_02432238_02441531 NA coding upstream 166682 2432238 ~ 2441589 (+)
CI01000029_02427134_02429596 NA coding upstream 178176 2426098 ~ 2430095 (+)
CI01000029_02684591_02727897 NA coding downstream 73941 2682519 ~ 2728167 (+)
CI01000029_02750295_02751549 NA coding downstream 139404 2747982 ~ 2751558 (+)
CI01000029_02772065_02813214 TBC1D32 coding downstream 163487 2772065 ~ 2814491 (+)
CI01000029_02860076_02868432 NA coding downstream 250331 2858909 ~ 2868937 (+)
CI01000029_02904113_02950205 NA coding downstream 295202 2903780 ~ 2951323 (+)
G152402 NA non-coding upstream 3339 2604404 ~ 2604932 (+)
G152374 NA non-coding upstream 80108 2527816 ~ 2528163 (+)
G152373 NA non-coding upstream 80896 2527075 ~ 2527375 (+)
G152359 NA non-coding upstream 118758 2489088 ~ 2489513 (+)
G152424 NA non-coding downstream 1952 2610530 ~ 2610754 (+)
G152426 NA non-coding downstream 5413 2613991 ~ 2614283 (+)
G152432 NA non-coding downstream 14904 2623482 ~ 2623909 (+)
G152433 NA non-coding downstream 15867 2624445 ~ 2624747 (+)
G152446 NA non-coding downstream 127238 2735816 ~ 2736051 (+)
CI01000029_01526863_01527414 NA other upstream 1080372 1526754 ~ 1527899 (+)
G151495 NA other upstream 2236349 366541 ~ 371922 (+)
G151415 NA other upstream 2383026 170521 ~ 225245 (+)
G152451 NA other downstream 153016 2761594 ~ 2762939 (+)
G153475 NA other downstream 936547 3545125 ~ 3562004 (+)
G153790 NA other downstream 2125011 4733589 ~ 4740107 (+)
G154587 NA other downstream 2662442 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2848663 5461497 ~ 5470346 (+)

Expression


Co-expression Network