G152374


Basic Information

Item Value
gene id G152374
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2527816 ~ 2528163 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU173065
GGCGAATCTCCCGTTTCACCCCATCCCAAAGGTTTTGTTCAACATTGTTAATAATAAGAAGAAATGTTATTTGAGCACCAAATTTGATGATTTCAGAATGATTTCTGAAGGATCATGTGACACTGAAGAGAGTGACTGCTGAAAATTCAGCCATCGCAGAATTACATTACATTTTTAAAATGTATTAAAATAGAAAACATTATATACATTTATTTAGACTATATAAATTATAATACATTGTATACATTAAATTTATACATAAATTATATATTATTTACTTTATTTACTAGTGCCAAATTCTCATAGGCCTATCAGTCAATGTCTAAATATAATTAAAACACAGTATGA

Function

NR:

description
PREDICTED: protein Wnt-7b isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173065 True 348 lncRNA 0.27 1 2527816 2528163

Neighbor

gene id symbol gene type direction distance location
CI01000029_02488613_02490983 NA coding upstream 36789 2488350 ~ 2491371 (+)
CI01000029_02445216_02480549 NA coding upstream 47152 2444973 ~ 2480664 (+)
CI01000029_02432238_02441531 NA coding upstream 86227 2432238 ~ 2441589 (+)
CI01000029_02427134_02429596 NA coding upstream 97721 2426098 ~ 2430095 (+)
CI01000029_02343103_02352351 NA coding upstream 175034 2340949 ~ 2352782 (+)
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding downstream 55207 2583370 ~ 2587697 (+)
CI01000029_02684591_02727897 NA coding downstream 154356 2682519 ~ 2728167 (+)
CI01000029_02750295_02751549 NA coding downstream 219819 2747982 ~ 2751558 (+)
CI01000029_02772065_02813214 TBC1D32 coding downstream 243902 2772065 ~ 2814491 (+)
CI01000029_02860076_02868432 NA coding downstream 330746 2858909 ~ 2868937 (+)
G152373 NA non-coding upstream 441 2527075 ~ 2527375 (+)
G152359 NA non-coding upstream 38303 2489088 ~ 2489513 (+)
G152281 NA non-coding upstream 42870 2482385 ~ 2484946 (+)
G152349 NA non-coding upstream 76746 2450784 ~ 2451070 (+)
G152402 NA non-coding downstream 76241 2604404 ~ 2604932 (+)
G152421 NA non-coding downstream 80108 2608271 ~ 2608578 (+)
G152424 NA non-coding downstream 82367 2610530 ~ 2610754 (+)
G152426 NA non-coding downstream 85828 2613991 ~ 2614283 (+)
G152432 NA non-coding downstream 95319 2623482 ~ 2623909 (+)
CI01000029_01526863_01527414 NA other upstream 999917 1526754 ~ 1527899 (+)
G151495 NA other upstream 2155894 366541 ~ 371922 (+)
G151415 NA other upstream 2302571 170521 ~ 225245 (+)
G152451 NA other downstream 233431 2761594 ~ 2762939 (+)
G153475 NA other downstream 1016962 3545125 ~ 3562004 (+)
G153790 NA other downstream 2205426 4733589 ~ 4740107 (+)
G154587 NA other downstream 2742857 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2929078 5461497 ~ 5470346 (+)

Expression


Co-expression Network