CI01000029_05214256_05215284 (TAAR12E, TAAR12F, TAAR12C)


Basic Information

Item Value
gene id CI01000029_05214256_05215284
gene name TAAR12E, TAAR12F, TAAR12C
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5214219 ~ 5215429 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_05214256_05215284.mRNA
AGTTAAACTAGATGGGCATGTACTCTTTGGATATTGGTCTTCACCAAACTATAATTTACTAAATTATTTTGTTTTACTTTGGTTTATAAATGTCTGACTTTTTATGGTTACAAAGAAAATCATTTCTGCATCTGAAGCAGACGTGATGACTTCAAATGAAACTGGCACTGAGGATGTGTTTCTCTGCTATCCACTCCTGCTGGACTCCTGTCCAAAATTGCATCGTCTTACTATAGTTAAAGTGGCAATGTATGTTTTCATGGTGCTGATGATCCTCACAACAGTTTTTGGGAATCTGCTGATCATCATCTCCATCTCTCACTTCAAACATCTACAGTCTCCAACTCATCTGATCATTCGCTCTCTGGCAGCTTGTGATTGTCTGCTGGGCTCTTTGATCATGCCTTACAGCATGGTGCGATCTGTTGAAGGCTGCTGGTATCTGGGAGATTTTGTGTGTAAAGTGCATTTTAGTTTAGACATGACCTTCTGTATCTCTTCCATACTACATCTCAGTTTAATATCTGTTGACAGGTACTGGGCTATTTGTGATCCTCTAAGGTACAAAATGAGGGTCACAAACAACACTGTGACTGTATTTACTACCTTCACATGGTTGTTTTCATTTGTGTACAGCTTTTATGTTGTGTTCTCAGGGGTAAATGCAGTTGGACTAGAGATGCTTATATTGCAGATTTCCTGTGTGGGAAGTTGTGTTCTGTTTTTTAACAAAGAGTGGGGCCTTATATGCCCAATTCTTACATTTTTCCTTCCCGGAATGATCATGAGCTCTCTGTATATGAAAATCTTCCATGTTGCACGAAAACATGCAAAGGTTATGTCTGAAAGAGTGACTGTGGTGACAAAAAGGGGGTTGAAGAGCAAAAGCTCTGCTCAAAGAGAAGGAAAAGCAGCAAAAACTCTGGCCATTGTCATGTGTGTGTTTTATTTCTGCTGGCTGCCTTTTTTTACTGTAACTACTCTCGACCCTTTTTTCAATTATTTAACCCCAGCTGATGTTTTTGATGCTGTAATTTGGTTTGCATATTTTAACTCCACCTGTAACCCCTTGATTTATGGATTTTTCTACCCTTGTTTTCAGAATGCATTTAAGATTCTTATATCCACTTATATCTGTGGCATCAAGGATTCAAACACCTTGACTTTTGAATGAATACAGCAAGCACACTTATTTCAAGCATCACAATAAA

Function

symbol description
taar12c Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR3P (trace amine associated receptor 3, pseudogene).
taar12f Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in olfactory epithelium. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR3P (trace amine associated receptor 3, pseudogene).
taar12e Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR3P (trace amine associated receptor 3, pseudogene).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K05051 TAAR; trace amine associated receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_05214256_05215284.mRNA True 1211 mRNA 0.38 1 5214219 5215429

Neighbor

gene id symbol gene type direction distance location
CI01000029_05208608_05209357 TAAR12E, TAAR12F, TAAR12J coding downstream 4696 5207640 ~ 5209523 (-)
CI01000029_05205497_05206423 TAAR12E, TAAR12F, TAAR12J coding downstream 6756 5205469 ~ 5207463 (-)
CI01000029_05189829_05190863 TAAR12H, TAAR12J coding downstream 23161 5189763 ~ 5191058 (-)
CI01000029_05186117_05187142 TAAR12J coding downstream 26907 5185861 ~ 5187312 (-)
CI01000029_05181056_05182090 TAAR12J coding downstream 31959 5180898 ~ 5182260 (-)
CI01000029_05219364_05220392 TAAR12E, TAAR12F, TAAR12J, TAAR12C coding upstream 3898 5219327 ~ 5220533 (-)
CI01000029_05229020_05230030 TAAR1B coding upstream 11750 5227179 ~ 5230139 (-)
CI01000029_05236272_05237282 TAAR10D, TAAR10B, TAAR10C, TAAR10A coding upstream 20686 5236115 ~ 5237532 (-)
CI01000029_05240748_05241758 TAAR10D, TAAR10B, TAAR10C, TAAR10A coding upstream 24459 5239888 ~ 5242021 (-)
CI01000029_05361419_05364642 NA coding upstream 145710 5361139 ~ 5364701 (-)
G154500 NA non-coding downstream 59338 5154519 ~ 5154881 (-)
G154498 NA non-coding downstream 69353 5144527 ~ 5144866 (-)
G154445 NA non-coding downstream 207242 5006497 ~ 5006977 (-)
G154415 NA non-coding downstream 223229 4986108 ~ 4990990 (-)
G154442 NA non-coding downstream 240255 4972971 ~ 4973964 (-)
G154730 NA non-coding upstream 47111 5262540 ~ 5262782 (-)
G154731 NA non-coding upstream 54422 5269851 ~ 5270384 (-)
G154732 NA non-coding upstream 55591 5271020 ~ 5271284 (-)
G154735 NA non-coding upstream 78784 5294213 ~ 5358001 (-)
G154809 NA non-coding upstream 160416 5375845 ~ 5376097 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 737007 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 1506967 3698572 ~ 3707883 (-)
G153891 NA other downstream 1927665 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 2621417 2587549 ~ 2592379 (-)
G156542 NA other upstream 1954938 7170367 ~ 7170951 (-)
G156495 NA other upstream 2150898 7365007 ~ 7371921 (-)

Expression


Co-expression Network