G151554


Basic Information

Item Value
gene id G151554
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 183260 ~ 187937 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU172159
NNNNNTCAGCAGAAGGTTGCTGGTTCAATCTCTGCAGCATCACCTCCAGTGTGTCCTTGATCAAGTCACTTGGAAGGAGGAGTGATGGAGGGTCTCATCCAAGGCTCTACACCATTTCCAGGATCTGCTGTGGCTCTCCATCCTCAGTGCTCACACCAGTCTAAGGACATTTCACATCTTTATATTTTTGTTTCAGGTTTTCCTTTTTTGCTGCAGTCACCTTGTCTTGTAGGTCCTGCTTCACCACAAAGCTCTGCAGCAAATGCACAGAAATCAAGATTCAGAAAAGTGCTGTAATAACTCTGTTTAAATTACAATAATTAAAATAAACTAGACTTTAGATTTAAATAGACTTATTCATTTCTGTAGTATCCTCACTCAAAGCCTTTGATGGCAGCATTCCTTCATCACCGGATAAACACACGTGTGATCATCTGTCCCTGTAACATCCAGACAAGATTCAAGTTTCCTCTGAGATTTATGTGCTTAAATCTACATTTACATGTTAATGATGTGTTAACTCTCTTTTTATCCAATACAAACGTTCCTTAATTTACCAACAGTACTAATGGTCAAATAAAATAGATTAAACTTATGTTTATTTTATGTAGATTAATTTATTTACATTATTTTCATTCATGTAATGTAAGCAGTGTTGACAACAGTGAATTCTACATAATAGCACACATACATCACTCATACATAATCCATAACTCATAAGCCATAATACTTAAAGAAGATGTTCCTGTCAGATGTTAAATAAACATTTAATAAGCACCTTTAAGATGTGGTTTAGAATATGTAAATCCACTTCGGAGAATTAAGTTATGTGTGTTTACTAGAGCTCCCCTGTAATCATAATAAATCGTGTTTTTACTGTAAAATCACAACTATAGTGCCTAGCATCTTTACACATTCAGCGGTTTACTCTAAAGTAGTTCAACAAATGCTATTTTATTACAAGGAACCGTGTTTTCAGTTTTCAATACTCACATTTGAAAGCATCCGCGCCGCTTTTCTCCTCCGTGTTCGATTATGACGTACCCTCTCCCGTGGCCTCCTGGGATAGAAAAGTATCGATCGAGGAACACTTCAGAATCTGGGCGGAAGCAGTAGGCCATCCGGGAACTTCTTGACATTTATGATTACTGAGGTTTCTGACATACTTAATTGCTCGCCTACTGCTTTTTCCCTATTATATAGTAGAGAAGTAGGCGGTTTCGGACGCACTTTAAGTAGACGCACGTCCGAATCTCGCGAGAATTAGTACGTCACCCAGGTAAAATTCACTCTTTTTGCTTCGGACATACTTATTCGCTCGCCTACTGCTTTTCCCCTACTAAATAGTAGAGAAGTAGGCGGTTTCGGACGCAGCCATTGTCTAGTTCCGTCAGACTTCCCTCATGCGTCTCCCAGATTGTTACTTACCTGACATGACACCTCCTTACCTGCTCTTCCTCTCCTCACCCATGTCTCCACATTATCTATTCATCAGTGACTGAGAAACTGTGGCAACGTACCCGTCTGTTATCCTCCTGCTGCATCTTCTATACATACCAGTTCATCCATCGTCTTGTGCATACTACTGTGTTCAATAAAGCTTGCTTGAACTTTACTTACCATCTCTCTGGTTCGTGTTTCCTGACAACTGTCCTGCAGAGTTTAGCTTAAACTGGTTTTAAAGAACCCTGTTTTATGACATTTTAAGTTTTTAGGAGAGAATGTGATGGAGGTGCCTGAGAAATGTTAAAAACAAAAAGTCGTTTAAAAAAAAAACTAGAACAAGGAAATAATAAAGTCAAATAAGTTAAACAGGTAACCTACATATGTTGTTGTGGTTTCCATAAGTATTCTGGGTTGATCATTTGACATTTTGCCCAGAAGAATTATTACTAGTTTACTCTGCAGATTATCAGGTAAGGTAAAAATGAGAAATTAGTGTCTCTTTTTTTTTTAAACTGCTCTTTTAAACCCTTTTATAGAAAGATCGTTTAAGGCAACATTACAAAACCCGAACTTTCTTGACATAAGTTGAGGTGTGCTTTTTGTAAGGTTTGGCTGAAATGTACCGTAATGGTTCTTTTCACACTGCATTTTTCTGCACAATATTTGGCACATTTGATGAGTGCTTAATTTCCTTACTGTAGGTCAAAAAATGTGTGGATGTGCTACTCTTGTTTCTCATTCAAACAAAAGAAAAGTCTTTTGTATCTGTCTTCTGCAAGGAATCTTTTGGAGCGACATCAAAAGTGTGCTGCAATGAACATGCAGTTTAGAAAGCTGGAAATCCCATCTGTTGCTTTGTCCATAGTAGTTTACTGTAAAGAATATGATCAGTAAGTCTACTCATAGCTACTTATGTTTTTACATTACTTTAACTCATCAAAATAATTTAAGCAAGTTTTACACGATTCAGCTCTATTTTATCTAAGTTAATGTAATTTAAGTTGAAATGACTTGTAAAACCATGTTGATTATACTTAAAATTTTAAGGCAGCAACTGAACTTAAGTTTTTAAGATGATATTAGTGGAAATGTTTTTACAGTGGTGTGAATTATTTACTGTATACATTACAATGGACCAAATGCTTCAGATGATTTATGAAATAAAGGATTGTTACGTTAAATGACCACAGTTGTACAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAGACTTGCCCTTGATAATAGTTTAACTTTAGTAATTCTAAATGATTCTGTATTTCATACACATGCTGTTTGGCTGTATCACATGAATATTAAAAAAAAGCAATTGTATTCTATCATTTATAATAGAATTTTCTGCTGAATAAAATAGGTGCCTAGATAAGCCACATATTTGTCTCTTTTTCTGAAGCTAGATTAAAGAGATCTGTCTTATACTCCCTGTGTGTTTTGTGGACTTTTGTACTGTTTCCTGTCTATCATCATGGTTTGTAGTTCTTTCCCTGTTGATTAGTTCTCACCAGGTGTTTCCCACACCCTCTAATTATCTCATCATCTTGTTTAGCTAGTCCTCTATGTAAATATAGTGCTCGTCTTACTCTTGTATTTTGTCAGTATTTTGTCATGACAGCGTCGTACTTGAATGCAAAATATGGTGAGTAAAGGTACAGTGAACTACATTGTTTTTGTTTCACTACAGCTATCTTTGTTGCAAATGCAAGATCTGGGTGTCTAAACTCAGTCCTGGAGGGCCACTGTCCTGCAGAGTTTAGCTCCAACTCGCCTCAACACACCTGCCTGGAAAGTTTCTAGTATGCCTAGACCTTGATTAGCTGGTTCAGGTTTCACATTACTCGTAATGTGGCACAATTGTCAGTACGAATTCTTCAATAGATATTAAGTGATGAATTTTGACAAAATGTGATTGTAAATGTTATAATAGTGATTTTATAATGTCTAAATATGAATTATAGAACAAAATTAGTGAGTAGTATGACAAAATGACTATTTTGACCAGCAGAGGGCAGCAGAGGACCAGTCATTGGCTCACTACAGTCTCAAGTACATTTTCTCTGTTAACTCCATTAAATGTGCTTACACACACACTTTTTGTTGTAGATATAGATATTCGAAATAAATGATAGGTAAGAATGTGCTTATTTCAGGTTTCACATTTAAAACATCATTTTCAGGTCTAATTGCAATCGAAATGTGATATTATTGGAGAAACTGATACCTAAAATGAACAACTGAAGTGATAAACTTTGACAAAATGTGATTTTTAATGTTATTATAATAATTTTATAAAGTTTAAATGTGATTTCAAATGAAAAAACCTTGAACAGAACTATTTATTGAGCAGAATGAGCCAATGAGTGGTCTTCTGCTGCCACCTGGTGGTTTAATGGCAATTTCAGTGAATATGCCATTATAATCATAGGAACATTGTCATTTTTCACCTTTGTAACTGTTATAGAGGCACATTTGGCCCGATCTGCCTGAAATTTGGCATGCTTGTTTAGAGTCATATGTCACATGTCCTTACTAATTTTCAAGAAGATCTGAGCATTCCTTGAGGAGTTTCGGTGACACTTGATCAAGGTTACATATTGAAATGACCCTATTATAGCCATATAAATGCAAAAGTTCAACTTTTTTGATAATTATTAATCTAGAGAGTCCAGAGAATTCCACTGCATTGGTTTTATTCAGATTGAGCAAAAAACCTAGGACTAGTTTGCAAAAGTTTTTTTTTTTTTGGTAATAATCTTGATTATTTAATAAACAATTTGATCGACAGCAATGGTTCTTGAGGCAAAGTTGTTCAAAATGAGATCTAACAAATGATATAAATATGATTATGTAGATGGAAAAGACCATTTACAGGCAATATACCATATGAAATGTATGGGTTTTTTTTTTTTTTTTTTTAAAGCTTTGCAACAGTTATAGCGCCACCTATGGTCCGATCTCCACCACTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172159 True 4436 lncRNA 0.35 3 183260 187937

Neighbor

gene id symbol gene type direction distance location
CI01000029_00076210_00177393 NA coding downstream 4355 75630 ~ 178905 (-)
CI01000029_00057245_00073837 NA coding downstream 109423 57245 ~ 73837 (-)
CI01000029_00031332_00056219 NA coding downstream 127041 31025 ~ 56219 (-)
CI01000029_00000004_00021646 NA coding downstream 160705 4 ~ 22555 (-)
CI01000029_00191495_00216075 NA coding upstream 2258 190195 ~ 216191 (-)
CI01000029_00238295_00240090 NA coding upstream 50071 238008 ~ 240090 (-)
CI01000029_00351260_00374024 PTCHD4 coding upstream 163323 351260 ~ 374024 (-)
CI01000029_00400646_00402700 NA coding upstream 212382 400319 ~ 403709 (-)
CI01000029_00520844_00524249 NA coding upstream 331897 519834 ~ 524342 (-)
G151553 NA non-coding downstream 168 181378 ~ 183092 (-)
G151603 NA non-coding upstream 119911 307848 ~ 308204 (-)
G151605 NA non-coding upstream 122589 310526 ~ 310749 (-)
G151610 NA non-coding upstream 128698 316635 ~ 316880 (-)
G151612 NA non-coding upstream 130580 318517 ~ 326627 (-)
G151624 NA non-coding upstream 153574 341511 ~ 348897 (-)
CI01000029_01293143_01293964 BATF3 other upstream 1104312 1292249 ~ 1294123 (-)
CI01000029_02589994_02592379 NA other upstream 2404229 2587549 ~ 2592379 (-)
G153891 NA other upstream 3060840 3248777 ~ 3286554 (-)
CI01000029_03698769_03707177 NA other upstream 3518286 3698572 ~ 3707883 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 4272406 4460159 ~ 4463540 (-)

Expression


Co-expression Network