Gene
RNA
| Item | Value |
|---|---|
| gene id | G152775 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 1658989 ~ 1659505 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU173531 | True | 517 | lncRNA | 0.31 | 1 | 1658989 | 1659505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_01645824_01650080 | NA | coding | downstream | 8909 | 1645715 ~ 1650080 (-) |
| CI01000029_01600901_01604213 | NA | coding | downstream | 53784 | 1600732 ~ 1605205 (-) |
| CI01000029_01576996_01590356 | ITPKB | coding | downstream | 66862 | 1576339 ~ 1592127 (-) |
| CI01000029_01353955_01354599 | NA | coding | downstream | 304390 | 1353536 ~ 1354599 (-) |
| CI01000029_01294841_01297423 | NA | coding | downstream | 361566 | 1294724 ~ 1297423 (-) |
| CI01000029_01688033_01695159 | SLC30A3, SLC30A2 | coding | upstream | 28352 | 1687857 ~ 1695233 (-) |
| CI01000029_01750119_01750442 | NA | coding | upstream | 90353 | 1749858 ~ 1750701 (-) |
| CI01000029_01758347_01773935 | TRIM54 | coding | upstream | 98806 | 1758311 ~ 1773935 (-) |
| CI01000029_01783528_01785599 | DNAJC5G, DNAJC5GA | coding | upstream | 123958 | 1783463 ~ 1785599 (-) |
| CI01000029_01788875_01811689 | CAD | coding | upstream | 129284 | 1788789 ~ 1811689 (-) |
| G152989 | NA | non-coding | downstream | 38695 | 1619702 ~ 1620294 (-) |
| G152965 | NA | non-coding | downstream | 131385 | 1526723 ~ 1527604 (-) |
| G152964 | NA | non-coding | downstream | 133963 | 1524813 ~ 1525026 (-) |
| G152939 | NA | non-coding | downstream | 193517 | 1465167 ~ 1465472 (-) |
| G152935 | NA | non-coding | downstream | 201793 | 1456965 ~ 1457196 (-) |
| G152742 | NA | non-coding | upstream | 177591 | 1837096 ~ 1851027 (-) |
| G152748 | NA | non-coding | upstream | 193576 | 1853081 ~ 1853608 (-) |
| G153085 | NA | non-coding | upstream | 275436 | 1934941 ~ 1937564 (-) |
| G153102 | NA | non-coding | upstream | 420567 | 2080072 ~ 2080284 (-) |
| G153105 | NA | non-coding | upstream | 436330 | 2095835 ~ 2096082 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 364866 | 1292249 ~ 1294123 (-) |
| CI01000029_02589994_02592379 | NA | other | upstream | 932661 | 2587549 ~ 2592379 (-) |
| G153891 | NA | other | upstream | 1589272 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 2046718 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 2800838 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 3326603 | 4986108 ~ 4990990 (-) |
