Gene
RNA
| Item | Value |
|---|---|
| gene id | G152748 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 1853081 ~ 1853608 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU173504 | True | 357 | lncRNA | 0.45 | 2 | 1853081 | 1853608 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_01812895_01814632 | NA | coding | downstream | 38449 | 1812805 ~ 1814632 (-) |
| CI01000029_01788875_01811689 | CAD | coding | downstream | 41392 | 1788789 ~ 1811689 (-) |
| CI01000029_01783528_01785599 | DNAJC5G, DNAJC5GA | coding | downstream | 67482 | 1783463 ~ 1785599 (-) |
| CI01000029_01758347_01773935 | TRIM54 | coding | downstream | 79146 | 1758311 ~ 1773935 (-) |
| CI01000029_01750119_01750442 | NA | coding | downstream | 102380 | 1749858 ~ 1750701 (-) |
| CI01000029_01943164_01970772 | RCAN2 | coding | upstream | 89037 | 1942645 ~ 1971005 (-) |
| CI01000029_02029449_02036156 | CYP39A1 | coding | upstream | 175818 | 2029426 ~ 2036156 (-) |
| CI01000029_02054840_02058175 | NA | coding | upstream | 200885 | 2054493 ~ 2058386 (-) |
| CI01000029_02099152_02101364 | CCDC25 | coding | upstream | 245404 | 2099012 ~ 2102007 (-) |
| CI01000029_02107558_02110456 | PBK | coding | upstream | 253722 | 2107330 ~ 2111349 (-) |
| G152742 | NA | non-coding | downstream | 2054 | 1837096 ~ 1851027 (-) |
| G152775 | NA | non-coding | downstream | 193576 | 1658989 ~ 1659505 (-) |
| G152989 | NA | non-coding | downstream | 232787 | 1619702 ~ 1620294 (-) |
| G152965 | NA | non-coding | downstream | 325477 | 1526723 ~ 1527604 (-) |
| G152964 | NA | non-coding | downstream | 328055 | 1524813 ~ 1525026 (-) |
| G153085 | NA | non-coding | upstream | 81333 | 1934941 ~ 1937564 (-) |
| G153102 | NA | non-coding | upstream | 226464 | 2080072 ~ 2080284 (-) |
| G153105 | NA | non-coding | upstream | 242227 | 2095835 ~ 2096082 (-) |
| G152762 | NA | non-coding | upstream | 259816 | 2113424 ~ 2114309 (-) |
| G153134 | NA | non-coding | upstream | 372109 | 2225717 ~ 2227563 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 558958 | 1292249 ~ 1294123 (-) |
| CI01000029_02589994_02592379 | NA | other | upstream | 738558 | 2587549 ~ 2592379 (-) |
| G153891 | NA | other | upstream | 1395169 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 1852615 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 2606735 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 3132500 | 4986108 ~ 4990990 (-) |
