Gene
RNA
| Item | Value |
|---|---|
| gene id | G154860 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 5746014 ~ 5748127 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175831 | False | 865 | lncRNA | 0.38 | 2 | 5746014 | 5748127 |
| TU175830 | True | 1067 | lncRNA | 0.40 | 2 | 5746959 | 5748127 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_05742709_05744779 | NA | coding | downstream | 1235 | 5742077 ~ 5744779 (-) |
| CI01000029_05724774_05734931 | NA | coding | downstream | 11083 | 5724774 ~ 5734931 (-) |
| CI01000029_05716319_05720037 | KIF3C | coding | downstream | 25977 | 5716110 ~ 5720037 (-) |
| CI01000029_05675041_05691687 | NA | coding | downstream | 54327 | 5674054 ~ 5691687 (-) |
| CI01000029_05664917_05665909 | NA | coding | downstream | 80105 | 5664303 ~ 5665909 (-) |
| CI01000029_05873343_05884423 | TFAP2B | coding | upstream | 124754 | 5872881 ~ 5884790 (-) |
| CI01000029_05889701_05899499 | TFAP2D | coding | upstream | 140974 | 5889101 ~ 5899772 (-) |
| CI01000029_06005746_06011523 | HADHB, HADHB.S | coding | upstream | 257009 | 6005136 ~ 6011523 (-) |
| CI01000029_06027418_06046659 | GAREML, GAREM2 | coding | upstream | 278217 | 6026344 ~ 6047017 (-) |
| CI01000029_06051592_06058664 | PREP | coding | upstream | 302420 | 6050547 ~ 6059138 (-) |
| G154853 | NA | non-coding | downstream | 54793 | 5690767 ~ 5691221 (-) |
| G154761 | NA | non-coding | downstream | 231928 | 5513150 ~ 5514086 (-) |
| G154821 | NA | non-coding | downstream | 273510 | 5471975 ~ 5472504 (-) |
| G154798 | NA | non-coding | downstream | 293463 | 5451989 ~ 5452551 (-) |
| G154818 | NA | non-coding | downstream | 304692 | 5441002 ~ 5441322 (-) |
| G154890 | NA | non-coding | upstream | 85672 | 5833799 ~ 5834024 (-) |
| G154894 | NA | non-coding | upstream | 96278 | 5844405 ~ 5844828 (-) |
| G154896 | NA | non-coding | upstream | 101143 | 5849270 ~ 5849499 (-) |
| G154899 | NA | non-coding | upstream | 108947 | 5857074 ~ 5857329 (-) |
| G156211 | NA | non-coding | upstream | 194305 | 5942432 ~ 5942667 (-) |
| G154415 | NA | other | downstream | 758589 | 4986108 ~ 4990990 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | downstream | 1268802 | 4460159 ~ 4463540 (-) |
| CI01000029_03698769_03707177 | NA | other | downstream | 2038762 | 3698572 ~ 3707883 (-) |
| G153891 | NA | other | downstream | 2459460 | 3248777 ~ 3286554 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 3153212 | 2587549 ~ 2592379 (-) |
| G156542 | NA | other | upstream | 1422240 | 7170367 ~ 7170951 (-) |
| G156495 | NA | other | upstream | 1618200 | 7365007 ~ 7371921 (-) |
