G155194


Basic Information

Item Value
gene id G155194
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6672937 ~ 6680968 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176220
ATAATTTTAAAGGCTGGGTTTTCTCCATTGCCATAACTGCCTCGCTAGGCGTCAGACCTTTGAGTGCAAACAGGCTGATTTCGTACTCAGTATCAGGGGACAAGTCTCTCACATTCACAGAGGTCTGAGTCGGCCCAACGTACAGCTCCTGACGTTTGCTGCCAGCCAACATGGGAACCATCTGCACCTTGTATCCAGTCACTTCCCCTATAGATGCATCCCACGTCACCCGCATTGACTTGGATGCAACCTCTGTGACTTGCAAGTTTGACGCTGGTTCAACGACTTCCTCGCCGCTAGCCAGCGAGCTGAGCTGGTCATCCACACTGTTGCACACCTGCGTGATGAGTGATTTCTCCACAGCTTTGATCATGTCGAAGTTTGGCACCGTGTACACGTGTGTTCTGTAGGGCGTTGAAGACATTTGTTTCAACTCTTCCTCATCTGCTTCTTTGATCCCCAAAGTGAAGATTTCAACTCCAGCATTCTTCAACCTCTTGGCGTAACCTTCAACAGGGTCCTGAGATTTCCCATCCGTGATAACTACGGCTACTCTGGGGAATCCCTTACGAGCACCGGCGGTCTCTGTGAACATGTTTTTCAGCAGGTAGTCCAGGGCTTCGCCTGTCATGGTGTTCCCGCCCTTGTATGGCAGATTGTTAATGGCTCTGAGCAGCTCGGCCCGTTTGAAGTACTGGTTAAGGTTAAACTCAGTTCTGGTGTCTGTGCTGTACTGAACCACGCCCACTCTAGTCTTGTCCTCTCCAAGGTCAAACGCGCCTGCCATGGCTGCTATGAAGCTGCGGATGAATTTAAAATTTTCCCGCCCGACACTCCAAGAACCGTCCACCAGGAAGACAAGATCAGCAATGGCACTTACTGAGCATTTGACTGCATCTGAGACCTGGGGCTTCCTGGTACCTACTTCAAAACCACTTGATTGGATTGTAATCTGTCCAGAGATTGGTATACTCTCCTCAGATCCAGAATATGAAGTTATCGTAACAACATAATCCACATCGGGGGTCAAATCTCTGATGGAGGTTTTGGTTGAGGATGGAGGAAGTGAGAATTCCTTAACAGGCTCTTCTGCACCCGATGTCACTTGTACTCTGAAGCCCTCAATCCTTGACAGCGGTTGCTTCCATATCATTTGCACTGTGTTTTCATTTAAAATCTTAAACTTCAAGTCTGATGGAGGCATTACTTGAGCTCTCACTGATGTCAGTACTGCGAGTGTTAAGAGAGCGGCCGCTGCCAAACGCCTGACCGTCATCTTCACCCCAATATCAGCAGAACATCAATCAATCAAACTCCCCAAAGTTTCCAAAATCTATCAATACATCACAAAAACTGGTAAATGAAAATGGAAATTTCGCCCGGATACAAAGGGATTTAAAGCTCTCTTCAGAAAAGCAAGAGATTCTCCGTGATGCTGTAGTGATGGAGATGACAATGAAGAGGAGGGTCTGATCACCCACAGCTCATGAAGGCTGATTTCAAATGCACAGGATCTCAGACTAGAATGTGCTTCTTAACAGGAGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176220 True 1548 lncRNA 0.48 9 6672937 6680968

Neighbor

gene id symbol gene type direction distance location
CI01000029_06494856_06495812 NA coding upstream 177090 6494391 ~ 6495847 (+)
CI01000029_06453008_06476863 NA coding upstream 195847 6453008 ~ 6477090 (+)
CI01000029_06443365_06447942 CRNKL1 coding upstream 224995 6443365 ~ 6447942 (+)
CI01000029_06347167_06348123 NA coding upstream 324768 6346660 ~ 6348169 (+)
CI01000029_06305668_06307332 NKX2.4B coding upstream 365262 6305245 ~ 6307675 (+)
CI01000029_06724205_06734079 HMBOX1B, HMBOX1 coding downstream 43237 6724205 ~ 6735582 (+)
CI01000029_06775631_06791278 INTS9 coding downstream 94663 6775631 ~ 6791346 (+)
CI01000029_06824397_06831521 CUNH14ORF169 coding downstream 142661 6823629 ~ 6832671 (+)
CI01000029_06834812_06849277 CPSF2 coding downstream 152609 6833577 ~ 6849518 (+)
CI01000029_06865685_06903896 SLC24A4, SLC24A4B coding downstream 184717 6865685 ~ 6903896 (+)
G155193 NA non-coding upstream 65832 6603095 ~ 6607105 (+)
G155196 NA non-coding upstream 70406 6602316 ~ 6602531 (+)
G155186 NA non-coding upstream 94443 6578275 ~ 6578494 (+)
G155162 NA non-coding upstream 157959 6514727 ~ 6514978 (+)
G155142 NA non-coding upstream 240132 6431948 ~ 6432805 (+)
G155218 NA non-coding downstream 7787 6688755 ~ 6689078 (+)
G155236 NA non-coding downstream 8313 6689281 ~ 6689937 (+)
G155248 NA non-coding downstream 40995 6721963 ~ 6722184 (+)
G155235 NA non-coding downstream 41376 6722344 ~ 6722557 (+)
G155249 NA non-coding downstream 63864 6744832 ~ 6747562 (+)
G155083 NA other upstream 182643 6431535 ~ 6490294 (+)
G155079 NA other upstream 384539 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1202591 5461497 ~ 5470346 (+)
G154587 NA other upstream 1401402 5271020 ~ 5271535 (+)
G153790 NA other upstream 1932830 4733589 ~ 4740107 (+)
CI01000029_06906861_06907157 NA other downstream 225220 6905834 ~ 6908633 (+)
G155522 NA other downstream 953865 7634833 ~ 7637834 (+)
G155627 NA other downstream 1250512 7931480 ~ 7932177 (+)
G156007 NA other downstream 2283850 8964818 ~ 9064541 (+)

Expression


Co-expression Network