G155274


Basic Information

Item Value
gene id G155274
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6852476 ~ 6852878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176301
ACGCTGGAAGGTCTCCCTCCTCTTTAGCCCGGAGGACACGGCGTCCGTGATTTCCAACAAGAATGTCAAATTTGGACTCGTCTGACCATAGAACACTTTTCCACTTTGAAACAGTCCATTTTAAATGAGCCTTGGCCCACAGGACACGACGGCGCTTCTGGACCATGTTCACATATGGCTTCCTTTTTGCGTGATAGAGCTTTAGTTGGCATCTGCAGATGGCACGGCGGATTGTGTTTACCGACAGTGGTTTCTGGAAGTATTCCTGGGCCCAATTAATAATGTCATTGACACAATCATGCCGATGAGTGATGCAGTGTCGTCTGAGGGCCCGAAGACCACGGGCATCCAATTAAAGTCTTCGGCCTTGTCCCTTACGCACAGAGATTTCTCCAGTTTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176301 True 403 lncRNA 0.49 1 6852476 6852878

Neighbor

gene id symbol gene type direction distance location
CI01000029_06834812_06849277 CPSF2 coding upstream 2958 6833577 ~ 6849518 (+)
CI01000029_06824397_06831521 CUNH14ORF169 coding upstream 19805 6823629 ~ 6832671 (+)
CI01000029_06775631_06791278 INTS9 coding upstream 61130 6775631 ~ 6791346 (+)
CI01000029_06724205_06734079 HMBOX1B, HMBOX1 coding upstream 116894 6724205 ~ 6735582 (+)
CI01000029_06494856_06495812 NA coding upstream 356629 6494391 ~ 6495847 (+)
CI01000029_06865685_06903896 SLC24A4, SLC24A4B coding downstream 12807 6865685 ~ 6903896 (+)
CI01000029_06906861_06907157 NA coding downstream 52956 6905834 ~ 6908633 (+)
CI01000029_06923683_06924032 NA coding downstream 70350 6923228 ~ 6924085 (+)
CI01000029_07132444_07166752 FUT8B, FUT8 coding downstream 279566 7132444 ~ 7166930 (+)
CI01000029_07206718_07211765 NA coding downstream 352809 7205687 ~ 7212408 (+)
G155253 NA non-coding upstream 100698 6751287 ~ 6751778 (+)
G155249 NA non-coding upstream 104914 6744832 ~ 6747562 (+)
G155235 NA non-coding upstream 129919 6722344 ~ 6722557 (+)
G155248 NA non-coding upstream 130292 6721963 ~ 6722184 (+)
G155236 NA non-coding upstream 162539 6689281 ~ 6689937 (+)
G155357 NA non-coding downstream 148561 7001439 ~ 7001888 (+)
G155367 NA non-coding downstream 158218 7011096 ~ 7011301 (+)
G155389 NA non-coding downstream 212827 7065705 ~ 7066055 (+)
G155391 NA non-coding downstream 221414 7074292 ~ 7074548 (+)
G155083 NA other upstream 362182 6431535 ~ 6490294 (+)
G155079 NA other upstream 564078 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1382130 5461497 ~ 5470346 (+)
G154587 NA other upstream 1580941 5271020 ~ 5271535 (+)
G153790 NA other upstream 2112369 4733589 ~ 4740107 (+)
G155522 NA other downstream 781955 7634833 ~ 7637834 (+)
G155627 NA other downstream 1078602 7931480 ~ 7932177 (+)
G156007 NA other downstream 2111940 8964818 ~ 9064541 (+)

Expression


Co-expression Network